Uncinocarpus reesii: UREG_02143
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Entry
UREG_02143 CDS
T01132
Name
(RefSeq) DNA-directed RNA polymerase II 138 kDa polypeptide
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ure
Uncinocarpus reesii
Pathway
ure03020
RNA polymerase
ure03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
UREG_02143
09124 Replication and repair
03420 Nucleotide excision repair
UREG_02143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_02143
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_02143
Enzymes [BR:
ure01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
UREG_02143
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
UREG_02143
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
UREG_02143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_6
RNA_pol_Rpb2_5
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
Motif
Other DBs
NCBI-GeneID:
8441339
NCBI-ProteinID:
XP_002542627
UniProt:
C4JKI6
LinkDB
All DBs
AA seq
884 aa
AA seq
DB search
MEEYEDEYGEDGYYEAEEGITSEDCWTVISSFFESKGLVSQQLDSFDEFISTTMQELVEE
QGQVTLDQTIAPEEDDPDPVLVRRYELKFGTVMLARPSMTEGDGATSIMLPQEARLRNLT
YASPLYLGITKKVAEGRERSLAERDEDEEPEEKGDEERRARGTYLQWAPRALPEDEEGEE
NIFIGKMPIMLKSKYCILKDLGEHALYNWNECPYDSGGYFIINGSEKVLIAQERSAGNIV
QVFKKAPPSPTPFVAEIRSAVEKGSRILSQLSIKLFAKGDSSKGGFGPTIRSTLPYIKTD
IPIVVVFRALGVVSDEDILNHICYDRNDTPMLEMLKPCIEEGFVIQDREVALDFISKRGS
SPTSMNHEKRVRYARDIIQKEFLPHISQSEGSETRKAFFLGYMVHKLLQCALGRRDVDDR
DHFGKKRLDLAGPLLANLFRVLFMRLTKDLYKYVQRCVETNRQLYLKIGVKASTLTGGLK
YALATGNWGEQKKAASSKAGVSQVLNRYTYASTLSHLRRTNTPIGRDGKIAKPRQLHNTH
WGLVCPAETPEGQACGLVKNLALMCYITVGTPSEPIIDFMIQRNMEVLEEFEPQVSPNST
KIFVNGVWVGVHRDASHLVSTVQSLRRRNLISHEVSLLEADKEIPADLDAEERRERYYGW
DGLVKSGVVEYVDAEEEETIMIVMTPEDLEASKQYRAGYIPEEDTSDPNRRVKSKLSQKA
HTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTNFDQRMETMANI
LYYPQKPLATTRSMEFLKFRELPAGQNAIVAIACYSGYNQEDSVIMNQSSIDRGLFRSLF
YRTYTDSEKMIGLTVVERFEKPMRSDTLRMKHGTGTWPENKTTY
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatacgaggacgagtatggcgaagatggctactacgaggcggaggaagggatc
acatctgaagactgctggactgtcatctcttcgttcttcgaatcaaaaggcctggtgtcc
cagcagctcgactccttcgatgaattcatttcaacgacgatgcaggaactggtggaggag
caggggcaagtgacacttgatcaaacaatagctcccgaggaagatgatcccgatccggtc
ctggtacgacgttacgagctaaagtttggcacggtgatgctcgcgcggccctcgatgacg
gagggtgacggagccacgagtatcatgttgccgcaagaagcacgcctccgaaacctgacg
tatgcgagccccctttatctcggaatcacaaaaaaggtcgccgaaggccgagaacgatcg
ctggctgaacgtgacgaagacgaagagccggaggaaaagggcgatgaagagaggagggcg
agagggacgtatctacaatgggcacctagagcgctgccggaagatgaggagggcgaagag
aatatcttcatcggaaagatgccgattatgttgaagtcgaaatactgtatcctcaaagac
cttggggaacatgcactttataactggaacgagtgcccttatgactctggaggctacttt
atcataaacggcagtgaaaaggttcttattgcgcaagagcgaagtgctggaaatatcgtt
caggttttcaagaaggctcctccaagtcctactccattcgttgccgagattcgaagtgcc
gttgaaaaaggctcgcgaatcctctcccagctgtctattaaacttttcgccaaaggagat
agctctaagggcggatttgggcctactattcgttctacgctaccctatatcaaaaccgat
atacctatcgtcgttgttttcagagctctgggagttgtttctgacgaagatattcttaat
cacatttgctacgaccgcaacgataccccgatgctagaaatgctaaaaccttgtattgaa
gaaggtttcgtcatccaggatcgtgaagttgccctcgactttatcagtaagagaggttct
tcgccgacgagcatgaaccatgaaaagcgtgtcagatatgcaagagatatcatacaaaaa
gagtttttaccacacatttcgcaaagtgaaggaagcgagactcgcaaagccttcttcttg
ggatatatggtgcataagctgctccaatgcgctcttggccgacgggatgttgacgatcgc
gatcatttcggcaaaaagcgtcttgatttagctgggcctttacttgccaacctgtttcga
gtgctctttatgcgactgacgaaagacctctataaatatgtccagagatgtgtcgagaca
aaccgccagctgtacctgaagatcggagtcaaggcgagcacgttgactggtggtctaaag
tatgctcttgctaccggaaattggggtgagcagaagaaggcagcgagctcgaaagccggt
gtctcacaggttctcaaccgttatacttatgcctctacgctctcacatcttcggcgaacg
aacactccaattggtcgtgacggcaagattgccaaacctcgtcagctgcataatactcac
tggggcctggtttgtcccgccgaaaccccggaaggtcaagcttgtggtcttgtcaaaaac
ttagctctgatgtgttacatcactgttggtacgcctagtgagcctattattgacttcatg
atccagcggaacatggaggttctagaagagtttgagcctcaagtgtctcccaattcaacc
aaaattttcgttaatggtgtctgggttggcgtacacagagacgcatcacacctcgtgagc
acagtccagtctttacgtcggcgaaacttgatttcacatgaagtcagcttgcttgaagcg
gacaaagaaatccccgcagatttggacgcagaagaacgtcgggaacggtattacggttgg
gatgggcttgtcaaatccggtgtggttgaatacgtggacgcggaggaggaggagaccatc
atgattgtcatgactcctgaggacttggaagcttccaaacaataccgggcgggatatatt
cctgaggaagatacatccgatcccaaccgccgtgtcaagtccaaactcagtcaaaaggca
cacacctggactcattgcgaaatccatcccagcatgattttaggtatctgtgccagcatc
attccgttccctgaccacaaccagtctcctcgtaatacataccagtccgctatgggtaaa
caagcgatgggtgttttccttaccaatttcgatcaaagaatggaaaccatggcgaacatc
ctctactatccacagaaacccctggccacaacgcggtcgatggaatttctcaaatttaga
gagcttccagccggtcagaacgcaattgttgctatcgcttgttattctggatataaccaa
gaagattctgttatcatgaaccagagcagcatcgaccgcggactcttccgaagcttgttc
taccggacatatacggactccgagaaaatgataggcttgacagtagtggagaggttcgaa
aagccgatgaggtcagataccctacggatgaaacacggaacaggaacttggccagagaac
aaaacaacatactaa
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