Uncinocarpus reesii: UREG_02603
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Entry
UREG_02603 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
ure
Uncinocarpus reesii
Pathway
ure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_02603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_02603
03012 Translation factors [BR:
ure03012
]
UREG_02603
Enzymes [BR:
ure01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
UREG_02603
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
UREG_02603
Translation factors [BR:
ure03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
UREG_02603
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_29
nSTAND3
AAA_22
AAA_16
DUF2145
AAA_19
Motif
Other DBs
NCBI-GeneID:
8441975
NCBI-ProteinID:
XP_002543087
UniProt:
C4JGU1
LinkDB
All DBs
AA seq
1222 aa
AA seq
DB search
MLDVDDYPALAETRADPFRIQQLLESVVNAEFHTEFSARTSDRVSCLLTCSIQLLRTVIA
VSEVGVSERDAKRAALLALRQELHRRNLLKAMFDHKARLTDLEEIYDYAAQFMCIPLFRI
RVIDGAQRFEVTIELKEQSLSATAADDSLSGAARRAIHDFNKKRAIFVAINDWAKPNNNV
TTLCDFKDFLAFYESLSPQRNAMRVKVNSSAIGENTSAYTASVYLHNERFAGPVIGFQEE
QARNLALLTAGVKLSQQDPDAWTRYTGTRDKSPPTPLSTPPNIIKDLQGLRLRLQTALSN
LEYWSRNKPDPPREMLAQQGSSNIPHLGSNGVPVPRPDHLANLKGMDCSSSSHDLPVYRH
LETIVRMVAENPISIITGASGSGKSTQIPQILFDHAIRDGSGTKCNIFVVQDGIANVRAT
AQRVATDRAQPLGSIVGYSDTVDPKLPVLSGSITYHTSEVLLDLLVAESQDLFETVSHVI
VDDLEQRSISTDLLLAYLKNKLAERQAEGKLVPKVILMGTNINVELFANYFRALSPGGSP
APCPCLHISIDSHLVQKYYLNDILEQLRSSYDTSELYRLLSEPQTSQFLSDESSQFKLYS
PPDSRMTISGPRPHTKQWASSVSGKSAPPFPLGLVVATVNHIRETSNDGKILVLLPSSNE
VERLKKLLDDSPLKNEANKHHWRVLTNPFTGSRTPLSFMAYSPTRRIILSASLEGSFAIP
DVRFIVDTGLYPVKLYDPLKPSTSQINCWIDKASLQNRVEQTGRHESGKYYALFTKEREE
TFDPYSTPAIRRLDLERACLDAKTIFPSGGLITDILSQVLEPPAPDCIQRSIRKLQVTNI
LDDEETLTPLGRIITSIPLSPSAGKLIVLGIIFRCLEPALILAATIDLADEFGTIFNFQN
PRTRRVSEPYKDFIKDSLSDHIGVINAFKDISESWAKFGADVARDMCRTKHIRHRMFLRV
WESVLRLENMLLDAGIIPKPTRGTEMGGTALNINSAEQALIKALLTRALFPNVAVKRDCP
DDLWRTATLEEVRRRPQMALSKHLESGSVAVFSALFSAQTGAVYLENATFIPPLLACLFT
ENLIQKNNLLHIESWAQYKLPMKHPVHVDGTPTSNFHKCKSALDKLIDLAVQDLATYKLK
RTAWYPSSQIRHRTESRRGRKLTYLSPYIRTGVAKELAEYLGRLSTPSPLMRKGPIKDSS
FIRWTPSESNSRQKTSSPAGTP
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgctagacgtcgatgattatcctgcattggccgagactagagccgatccgtttcgcatc
cagcagttattagaatcagtcgtcaacgccgaattccacactgaatttagtgcacgaaca
tctgaccgggtcagctgtttgcttacatgctctatccaacttctgcgcacggtaattgcc
gtttccgaagttggagtttcagaaagggatgcaaaacgagcggcgctgcttgcgcttcgg
caagagcttcacaggcgcaacctacttaaggctatgttcgaccataaagctaggctgaca
gacctggaggaaatctatgattatgctgcccaatttatgtgtatcccactatttcgaatt
cgcgtaattgacggggctcagaggttcgaagtcactatcgagttaaaggagcagtctctc
agtgctaccgccgccgatgactcgttgagcggagcagcaaggcgggcaattcatgatttc
aacaagaaaagagcaattttcgttgccataaatgattgggcaaaacctaataacaacgtg
actactttgtgtgatttcaaggatttccttgcattctacgagtctctcagcccccagcgc
aatgctatgcgtgtcaaggtgaattcctccgcgataggagaaaacacatcggcttacacg
gcttctgtatacttacataacgagcggtttgcaggtccggtcatcggtttccaggaagaa
caagcgcgcaaccttgcgctactcactgcaggggtaaaactctctcaacaggatccagat
gcttggacaagatatacaggcacaagggacaaatcgccaccaactccgctatctactcct
ccaaacattatcaaggatctacagggcttgaggttacgcttacagactgccctctccaac
ctagagtactggtcgagaaataaaccagatccaccgagagagatgctggctcaacagggg
tcgtcgaacataccgcatctaggttccaatggcgtgccagttcctcgccctgaccacctt
gcaaatttaaagggcatggattgcagctctagctcacacgatttgcctgtctatcgccac
ctcgaaactattgtccggatggttgctgaaaaccccattagcattatcacaggcgcttca
ggaagcgggaaatcaactcaaattccccaaatcctctttgaccacgccattcgagacggt
tccggaacaaagtgtaatattttcgtcgtccaagacgggatagcaaatgttagagcaact
gcgcagcgagtcgccacggaccgtgctcaaccacttggaagtatagttgggtatagtgac
acagttgaccccaagctcccagtcctgtcagggagtatcacataccataccagcgaagtg
cttctagatctactcgttgccgagtcgcaggacctcttcgagaccgtttctcatgtgatt
gttgatgatcttgaacagcgaagtatttcaacggacttgctcctcgcatatctgaaaaat
aaattagcagagcgacaagccgaagggaagttggttccaaaggtcatcttgatgggcacg
aacatcaatgttgagctttttgcgaattattttcgggctctatctccgggtggtagccct
gctccttgtccatgtctccatatctcaattgattctcacctggtgcaaaagtattacttg
aacgacatacttgagcagttacgttcgagctacgatacatctgagctatatcgtttattg
tcggagcctcaaacctctcaattcctgtccgacgaaagctctcaattcaaattgtattcg
ccgccagattcccggatgaccatatctggaccgcgtccccataccaaacaatgggcctcg
tcagtttcgggtaaatcggctccgccgtttcccctcggtttagtcgtggcaaccgtcaac
cacattcgagagacaagcaatgatgggaagatcttagtcctacttccatcttcgaatgag
gttgaacgtttgaaaaagttacttgatgattcacccctcaaaaacgaagcgaacaaacat
cactggagggtcttgacaaatcctttcacgggcagccgaactcctttatcatttatggcg
tattctccaacccggagaattattctttcagccagcttagaaggaagttttgctattcca
gatgttcgctttatagtagacactggtctctacccagtaaaactatatgatccattgaaa
ccaagcacctcgcaaatcaattgttggattgataaagcgtcgttgcagaaccgagtagag
caaactggacgccacgaatccggaaaatattatgcgctatttactaaagagagagaagaa
acgtttgacccttattcaactccagctatccgccggctcgatttagagcgtgcttgcctt
gatgcgaaaactattttcccgtctggcgggttgattaccgatatcctatcccaagtatta
gaaccacccgccccggattgcattcaacgatcgatccgtaaacttcaggttacaaatatc
ctggacgacgaggaaacattaactccattaggacggatcatcacgtcgattcccctctcg
cccagtgcaggcaagttaattgttctagggatcatatttcgctgccttgagcctgccctc
atacttgctgcgactattgacctggccgatgaattcggaacgattttcaatttccaaaat
cctcgaacgcgacgggtttcggaaccttacaaagatttcattaaagacagcttaagcgac
cacattggggtcatcaatgcattcaaagacatcagcgagtcatgggcaaaattcggcgca
gatgtggctcgtgacatgtgccgaacaaaacatattagacaccgaatgtttctgcgagta
tgggaatcggtccttcggctagaaaatatgctcttggacgctggtatcatccctaagcct
actcgaggcaccgaaatgggtggtaccgcattgaacataaattctgctgaacaagctctc
ataaaagccctcttaacacgtgccttattcccaaatgtggcagttaaaagggactgtcca
gacgatttatggaggacggcaacattggaagaagtccgacgtcgcccacaaatggccctt
tcaaaacacctagagagcggctccgttgcggtgttctcagccttgttctcggctcagact
ggcgccgtctaccttgagaacgcgacattcattccgcctttgttggcgtgtttgtttacg
gaaaatttgatacaaaagaataatttattgcacatcgaatcatgggcgcagtacaaattg
cccatgaaacacccggttcatgtggatggcacgccaacctcgaatttccacaagtgcaaa
tctgctctggacaagttgatcgacctagctgtgcaagaccttgccacgtacaagcttaag
aggaccgcctggtatccttcgtcgcagattcgacatcgtaccgaatctagacgaggacgc
aagctcacctatttgtctccgtatatccggacaggtgttgcgaaggagttagccgaatac
ttgggtagattgtccacccctagtccgctgatgagaaagggcccgataaaagattcttcc
ttcattagatggactccatcagagagtaattcacggcagaaaaccagcagcccggcagga
accccgtga
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integrated database retrieval system
