Uncinocarpus reesii: UREG_02728
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Entry
UREG_02728 CDS
T01132
Name
(RefSeq) Spt5p protein
KO
K15172
transcription elongation factor SPT5
Organism
ure
Uncinocarpus reesii
Pathway
ure03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
UREG_02728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_02728
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_02728
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
UREG_02728
RNA polymerase I system
UREG_02728
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
UREG_02728
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
CTD
KOW5_SPT5
KOWx_SPT5
KOW
Spt5_N
KOW4_SPT5
KOW2_Spt5
KOW1_SPT5
DUF3912
Motif
Other DBs
NCBI-GeneID:
8437513
NCBI-ProteinID:
XP_002543212
UniProt:
C4JHP2
LinkDB
All DBs
AA seq
1052 aa
AA seq
DB search
MSHLSDSFLDQNPASEEEDDDFNPAPAEDSDAERDDNAERKNENRNPDSDVEDANSENER
ITRTPAARHQDGDREVDRVNEKAEENGDAEGDGEAEGEDEGQEEDEDEEEEEEEEEITGR
PRKRRRGGLNNFFEEEAEVEEEEEDMEEEEEDLEAEFLHPDDDAILPAGAETDDRRHREL
DRKRDLEASMDAEKQAQALKERYGRNRAAASDLVVVPKRLLLPSVDDPSIWAVKCRPGKE
REIVFNIMKRMEERHPGSRNPLRITSAFERGGTMSGYIYVEARKQADVMDALENLSNVFI
RSKLTLISVKEMPDLLRVQKSEELQPGGWVRIKRGKYQGDLAQIEEVETNGLEVTVRLVP
RLDYGLNDDVHIPNGDSKRKRPGGANAAVARPPQRLFSEAEAKKRHGRYLSAAAGLGGKS
WTYLGDTYIDGFLIKDMKIQHLITKNVNPQLGEVTKFARGADDGTANLDLASLAASLKNT
TGEDSYVPGDTVEVFSGEQRGVVGKVLSGRADIVSITVTEGELEGQRLEVPVKGLRKRFS
EGDHVKVIGGSKYRDELGMVVRIKDDRVTLLTDMSMQEITVFSKDLREADDAGVDGKLGQ
YDVHDLVQLDQTTVGCIIKLDRESMKVIDQHGSIRNLLPSRVIGKIELRRNAVTTDRNGA
EIKYGDTVREVTGEQRLGVILHVHRAFLFMQSKVVGDNAGIIVSRASNVVTVATSGGSLA
PRGPDLSKMNPALQKNGLNGSGMPPPRTVGRDRTVGKTVTIRKGPYKGLLGIIKDTTDDI
ARVELHSVSKVVPVEKENLTIKDPITGQPIDLRQFGRGAGRGGSRIPQSSAAPPRSQSSW
QGGRTPMAASDSSRTPAWRASSSRTPAWNAAASGARTPSWKTDGSRTVNAYDAGYKTTLG
SRTPAWAAGSKTPRDFSSGFGGSSSNSGASGFDAFLAGSRTPAHHAAFGGSRTPAWGHGS
GSGGKAFDAPTPGGDYAAPSPAAFGAAPTPGASAPTPRPWNDTAPTPGATSAPTPGDSAY
SAPTPAGGMGLPATPGAIDDGGPRYEERTPSP
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacctttccgactcgtttttggatcaaaatccagcatctgaagaggaagatgac
gatttcaatccagcgcccgctgaagattctgatgctgagcgtgacgataatgcggaacgc
aaaaatgaaaaccgtaatcctgacagtgacgttgaagatgctaattccgagaatgagagg
attacccgtacaccagcggccagacatcaggatggggatcgtgaagttgatagggtgaat
gaaaaagcggaagagaatggggacgcagaaggtgacggcgaagcggagggagaagatgag
ggtcaggaggaagacgaggatgaagaagaagaagaggaggaggaagaaataactggccgc
ccacggaagcgtagacgaggtggactgaataacttcttcgaagaagaggcagaggtcgaa
gaagaagaagaggatatggaggaggaagaagaagacttggaagctgaatttcttcatcct
gacgacgatgcaatcctgcccgctggcgccgaaaccgatgaccgcaggcatcgtgaactt
gacagaaagcgagaccttgaggcatccatggacgcagagaagcaagcgcaagctcttaag
gaacgatatggacggaatcgcgctgcggcatctgatttggtcgttgtccctaagagatta
ttgctacccagtgtcgatgaccccagcatatgggccgtcaagtgccgccctggcaaggaa
cgcgagatagttttcaatataatgaagagaatggaggaacggcatccaggctcaagaaac
cctcttcggatcacatccgcatttgagcgaggcgggaccatgagcggttatatctacgtt
gaagcccgcaagcaggcagatgtcatggatgctttggaaaatctatccaacgtcttcatt
agatcaaaattgaccttgatatctgtgaaggagatgcctgaccttctcagagtacagaaa
tcagaggaattgcaacctggaggctgggtccgaatcaagcgaggaaagtaccagggtgat
ttagcgcaaatagaagaagtggaaaccaacgggctcgaagtcaccgttagacttgtacca
cgtctcgactatggcctaaacgacgatgttcacattccaaatggcgactcaaagcggaaa
cggcctggtggcgcgaatgctgcagtggctcgccctcctcagcgcctgttcagcgaagca
gaagcaaagaagagacacggaagatatctatctgcagccgctggcctaggcggcaagtcg
tggacctaccttggcgatacttatatcgacggtttcctcatcaaagatatgaaaatccaa
cacctgatcaccaagaacgtgaatccccaacttggcgaggttacaaaatttgcacgaggc
gccgacgatggtactgcaaacctagatctggcgtcgttagccgccagtctcaaaaacact
accggcgaggattcctatgtgcctggggacaccgttgaagtattcagtggcgaacagcga
ggcgttgtcggtaaagtcttatccggtcgcgcagatatcgtttccattactgtaacagag
ggcgaattggaaggtcaaagactcgaggttccggtcaaaggtctacggaagcggttcagt
gaaggtgatcatgtaaaagtcatcggtggcagcaaatatcgagatgagctcggaatggtg
gttcgaatcaaggatgatcgagttacactgctcaccgacatgagcatgcaagagatcaca
gttttcagcaaagatttgcgggaagcagatgatgctggtgtcgacggaaaacttggccag
tacgatgttcatgaccttgtccagctcgaccaaaccaccgttggttgcattatcaagctc
gatcgcgagtccatgaaagtcatcgatcaacacgggtcaatcagaaatttgctcccatcg
cgagttatcggaaagattgaacttcgacggaatgcagtgactaccgatagaaacggcgct
gaaatcaagtatggtgacactgtccgtgaggttacgggcgagcagaggctaggcgtcatc
ctccacgtgcacagagcgttccttttcatgcaaagtaaggtggttggggacaatgctggt
atcattgtatcgagagcatccaacgtcgtgactgtggccaccagtggaggaagtttggca
ccccggggcccggatttgtccaaaatgaatcccgcattgcagaaaaacgggctgaacgga
tctggtatgccgccacctcgaactgttggaagagatagaactgttggcaagacggtcacc
attcgtaagggtccgtataagggtctccttggtattatcaaggacacaacagacgatatt
gcaagagttgaactacattctgtctctaaggttgttcctgttgaaaaggaaaatcttacc
attaaggatccaataactggtcagcccattgatcttcgtcaatttggtcgtggagctggc
cgtggaggttcccgtatcccccagtcttcagctgctcctccaagatcacaaagttcctgg
caaggtggtagaacccccatggcagcaagtgactcttctcgcacacctgcatggcgtgct
tcgtcctcaagaactcctgcatggaatgccgccgcaagtggtgctcgcactccgtcttgg
aagacggacggctcacgaacagtcaatgcctatgatgccggatataagacaacacttgga
agccgaactcctgcttgggcagccggcagcaaaacgccccgtgatttctcgtctggattt
ggtggatcttcgtcgaattctggggcctctggatttgatgctttccttgcaggctctcga
actccggctcatcacgctgcttttggtggttctcgcacacctgcttggggccatggctct
ggttctggcggcaaggcttttgacgcccccaccccaggtggagactacgccgctccttct
cccgcagcctttggggccgcaccaacacccggtgcatctgctccaacgcctcgtccgtgg
aacgataccgctccaacccctggagcgaccagcgcacccacacctggcgattctgcttac
agtgctcctactcctgcgggtggaatgggtctgccggccacacctggtgcgattgatgat
ggtgggccaaggtacgaagaaaggacgcctagcccgtga
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integrated database retrieval system
