Uncinocarpus reesii: UREG_02739
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Entry
UREG_02739 CDS
T01132
Name
(RefSeq) DNA mismatch repair protein msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
ure
Uncinocarpus reesii
Pathway
ure03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
UREG_02739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_02739
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
UREG_02739
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
DUF5740
AAA_27
AAA_29
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
8437526
NCBI-ProteinID:
XP_002543223
UniProt:
C4JHQ3
LinkDB
All DBs
AA seq
1200 aa
AA seq
DB search
MKSQRSILGFFQPKSSPCTPPTSSRVNKVKEEPNSSPAPNGAKSSVQSTKQTAKSRRGLH
LTPAPSSDAVEPGSDDFNVHQSTIEKVKGSLSTVDVSLPSPATSANGHNGGQAESEQETS
VTPTRRARKAINYEESEDDEIVKPTSRRLVTGRATKKRKTIAVSEDEDEFQLGNTDFFDD
DDFIVPDESEDEAGSSRKRKRSSNNLATKSAPMSSPRDEEPVLDIPNVGSGTTQKWTYNP
ADIESREPRTALARPSPSSKSLEKRKEKAHMTEPEKRYPWLANILDIEKNPPGHPDYDPR
TLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIGHQLFDLKLTDR
VNMRMVGVPESSLEHWANQFVAKGFKIARVDQSESALGKEMRERGDKKKGDKIIKRELSC
VLTAGTLVDGAMLQDDMSTYCVSIKEALVDDLPAFGVSFVDTATGQFFLTEFVDDIDMTK
FETLVAQTRPQELLLEKGFMSPKALRILKNNTNPTTIWNHLKPGREFWDASTTRRELEAG
EYFVSMDQDNIEAWPEVLQQVRDKDLVISSFGALIQYLRMLKIERDLITIGNFTWYDPIR
KASSLVLDGQTLINLEIFANSFDGGQHGTLFQLLNRCITPFGKRLFKQWVCHPLMDSRQI
NARLDAVEALNADSSIRDQFSSQLTKMPDLERLISRVHAGTCKCQDFVRVLEGFEQIDYT
MGLVKQTGSGDGVIGQLISSMPDLTSLLQYWETAFDRVKAKDSGTFIPQPGVEEDFDASN
ERIESLEGDLNQLLKRCRRELNCSAIVYRDNGKEIYQLEVPIKVKNIPKSWDQMSATKQV
KRYYFPELRGLIRKLQEAQEMHSQIVKEVTGRFYARFDEHYPTWLAAVKIISQLDCLIGL
AKASAAIGYPSCRPVFVDDERSVLEFQELRHPCMLSSGDFIPNDVKLGGDTSSINLLTGA
NAAGKSTVLRMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELS
ETKKILSEATSRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAE
FEGHPEIAPRRMRIRVDEEDRRVTFLYKLENGVAEGSFGMHCASMCGIPSKVVERAEVAA
KQWEHTSRLKDSVERKKGSGLVGLGWWSDVAWILKEDGAENPSASGERGIEVLLKAIENM
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgaagagccagagatctatcctgggcttctttcaacctaaatcgtcgccatgcactcct
ccaacttcctcgcgcgtgaacaaggtcaaggaagagccgaattcgtcgccagctccgaat
ggtgccaaatcgagtgtccaatcgaccaagcagaccgcgaaaagccgtcggggccttcat
ctcacccctgccccgagtagcgatgccgtggaaccgggttctgacgacttcaacgtccac
caatcaaccattgaaaaggtgaagggaagtcttagtactgtggacgttagcttgccttct
cctgctacgtctgctaacgggcacaatggagggcaggctgagagtgaacaggaaacttcg
gtaaccccgactcgccgagcgagaaaagctatcaactacgaggagtcggaggatgatgaa
attgttaaacctacctcgagacgactagtgactggacgagcaactaagaagagaaaaaca
attgcagtgtcagaagatgaggacgagttccaattgggcaatactgattttttcgacgat
gatgatttcatcgtccctgatgaatccgaggacgaagctggctcgtctaggaaacgcaag
cggtcatccaacaacctggctaccaagtcagcccctatgtcttcaccacgtgacgaggaa
ccggttctagatatccccaatgtcggctctggaactactcagaaatggacctataatccg
gctgatatcgagtctcgcgagcctcgaacagcattagcccggccctcaccttcatccaaa
tcgttagaaaagagaaaggagaaagcccacatgacagagccggaaaagcggtatccatgg
cttgcaaacatacttgacatagaaaagaaccctcccggtcaccctgactatgacccgcgg
actttgtatatccctccactcgcgtggacaaaattttctccattcgagaaacagtactgg
gaaatcaaacaaaagttttgggacactgttgttttctttaaaaaggggaagttttatgaa
ctttacgagaacgacgccaccattggacaccagttgtttgatctcaaacttactgaccga
gttaatatgcggatggtaggggtaccagagtcgagcttagagcactgggcgaatcaattc
gttgccaaagggttcaaaatcgcgcgggtcgaccagtcagagtctgcactgggaaaagaa
atgagagaaaggggtgacaagaaaaagggtgataaaatcatcaagcgagaattgagctgt
gtcctcacagctggcacacttgtggacggtgccatgcttcaagacgacatgtcaacgtat
tgtgtttccatcaaagaagccttggtagacgatctcccggcttttggggttagctttgtc
gatacggccacggggcaattctttctaaccgagtttgttgacgatattgatatgacaaaa
ttcgaaactctggtggcccagacccgaccgcaagagcttctactcgagaaaggtttcatg
tcacccaaagctctccgaattttgaaaaataacacgaacccaacaaccatttggaatcat
ctaaagccgggtcgcgaattttgggatgcatctaccactcgtcgagagcttgaggcaggt
gaatatttcgtttctatggatcaggacaatattgaggcatggcctgaagttctacaacaa
gttcgagataaagacctagtgatttcatcattcggtgccctaatccagtaccttcggatg
ttaaagattgagcgagacctcattaccattggcaatttcacttggtacgatccaatcagg
aaggcttccagccttgtgctagacggacagacccttattaacctcgaaatcttcgcaaac
tcttttgatggcggtcagcacggaacattattccaattgctcaaccgttgtatcacaccg
tttgggaagcggttgtttaaacaatgggtttgccacccactgatggattcaaggcagatt
aatgctagacttgacgctgttgaggcgttgaacgcggacagcagtatacgagatcagttc
tcatcccagctgacgaagatgccagacctcgagcgcttgatttcccgcgtccatgccgga
acctgcaaatgtcaggatttcgttcgtgtcctcgaaggatttgagcaaatagactatacg
atgggtctcgtgaagcagaccggctctggcgatggggtcattggacagctcatttcttcc
atgcccgatctgaccagcttattgcagtattgggagactgcgttcgaccgcgtgaaagcc
aaagatagcggaacttttattccacagccaggagtggaggaagattttgatgcgtctaat
gagcgcattgagagcctcgagggtgacctaaaccagcttttgaaacggtgtcgcagggaa
ctgaattgctccgcaatagtataccgcgataacggcaaagaaatctatcaacttgaggtg
ccgatcaaggtgaagaatattccaaaaagctgggatcaaatgtccgccacaaagcaagtg
aagagatattatttccctgaactccgtggtcttatcagaaagcttcaagaagcgcaagaa
atgcacagccaaatcgtcaaagaggtgaccggtcgattctatgctcgttttgatgaacat
tatccaacttggcttgcggcagtgaagataatttcccaactcgactgcttgattggttta
gcaaaggcatccgcagctattggctacccgagttgccgtccagtttttgtcgacgatgag
cgtagcgtccttgaatttcaagaactccgccatccctgcatgctctcctcgggggatttc
atcccgaacgacgtgaagttgggtggggatacttcaagcatcaatcttctaaccggtgct
aatgcagctggaaaatcaactgttctgcgaatgacgtgtactgccgttatcatggcccag
attggctgctatgtgccatgcgcatcagctcgactgacgcccgttgatcgaatcatgtca
cgacttggcgcaaacgacaacatcttcggtgcacagtcaactttctttgttgaactgtcg
gaaaccaagaagattttgtccgaagcaacatcgcgttcgcttgtgattttggacgagctt
ggtcgtggaactagctcctacgatggggttgcagttgctcaggctgtattgcatcatgtt
gcaacgcatattggcgcactgggtttctttgcgacccactaccactcgctcgctgccgaa
tttgaaggacatccagaaatcgctcctcgccgtatgcgtatccgtgtagacgaggaggat
agacgagttacgtttttatacaaattggaaaacggagttgctgaaggaagttttggcatg
cactgcgcgtcgatgtgcggtatccctagcaaagttgtcgaaagggcagaggttgctgcc
aaacaatgggagcataccagtcgattgaaagacagtgttgagaggaaaaagggaagtggg
cttgttgggctcggttggtggagcgatgttgcatggattctcaaggaagatggtgcagag
aatcccagtgcttccggtgaaagaggcatagaagttttgctaaaagcgattgagaacatg
tga
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