KEGG   Uncinocarpus reesii: UREG_02938
Entry
UREG_02938        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K14403  cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ure  Uncinocarpus reesii
Pathway
ure03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    UREG_02938
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ure03021]
    UREG_02938
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_02938
Transcription machinery [BR:ure03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     UREG_02938
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     UREG_02938
    U7-dependent histone pre-mRNA processing factors
     UREG_02938
SSDB
Motif
Pfam: CPSF73-100_C Beta-Casp Lactamase_B Lactamase_B_6 RMMBL Anti-Pycsar_Apyc1 Lactamase_B_2 Lactamase_B_3
Other DBs
NCBI-GeneID: 8442075
NCBI-ProteinID: XP_002543422
UniProt: C4JIS7
LinkDB
AA seq 875 aa
MAAKRKAAALSAGHDDEPVDPSDELLFNCLGGGNEVGRSCHIIQYKGKTVMLDAGMHPAK
EGFAALPFFDEFDLSTVDVLLVSHFHLDHSAALPYVLSKTNFKGRIFMTHATKAIYKWLI
QDNVRVSNTSSSSDQRTTLYTEQDHLSTLPLIEAIDFNTTHTINSIRITPFPAGHVLGAA
MFLISIAGLNILFTGDYSREEDRHLISAEVPKGIKIDVLIAESTFGISSSPPRLERETAL
MKSVTSILNRGGRVLMPVFALGRAQELLLILDEYWSRHPDLQKVPIFYIGNMARRCMVVY
QTYIGAMNDNIKRLFRERMAEAEAKGDKSTTAGPWDFKFVRSVRNLERFDDVGGCVMLAS
PGMLQTGTSRELLERWAPSERNGVIMTGYSVEGTMGKQILNEPEQIPAVMSARTGIGLGR
GRIPDGDDEQKVMIPRRCTVEEISFAAHVDGVENREFIEAVAAPVVILVHGEKHQMMRLK
SKLLSLNAEKTVKVKIYSPSNCEEIRIPFTVDKIAKVVGRLAETSPPTADYDDSRLMNGV
LVQNGFQLSMMAPEDLREYAGLTTTTITCKQHITLGTASIELIKWALEGTFGSIEEIGTQ
RREMGANGHTAKEDHNATAAKEEADEEIPFDETVAYLIMGCVILKYSPRTKAIELEWEGN
LMNDGVADAVMAVLLTVESSPAAVKRSSKKHHHAHHAPELPNPHSYLTPEERFARLLMLL
EAQFGPNIAPIERPKITRPSTNHHTNGTAAAKSEPDASGQDAERQPDEDEDIEDLEEAEL
VRLQALGIPVPGIEIKVDKHVARVWLETLEVECPYAVLRDRVRVVVERAVETVADLWSSK
AASPRKADVHGKTRAGEAAEVGVELEMKPVLAVKM
NT seq 2628 nt   +upstreamnt  +downstreamnt
atggccgcaaagcgcaaggccgcggctctttcggccggccacgatgacgagcccgttgac
ccgtccgacgagctgctcttcaactgtctcggcggcgggaacgaagtcgggcggtcatgc
catatcatccagtacaagggcaagacagtcatgctcgacgccggcatgcatcccgcgaaa
gagggctttgctgctctgcccttcttcgacgagttcgacctcagtacagtcgatgtcctt
cttgtgagccatttccatttggaccactccgccgccctcccctacgtcctcagcaagacg
aatttcaagggccggatcttcatgacccatgccacgaaagcaatctacaaatggctaatc
caggacaacgtccgagtgagcaacacctcgtcctcgtccgaccagcgaaccacgctctac
accgaacaggatcacctgtccacgctccctctgatcgaagccatcgacttcaataccacc
cacaccatcaacagcatccggataacccccttccctgctggccacgtgctgggtgccgcc
atgtttctcatctccatcgcgggcttgaacatcctatttacaggcgactactcccgcgag
gaggaccgtcatctcatctccgctgaggtcccaaagggcattaaaatagacgttttgatc
gccgaatcaacttttggcatttcgtccagtccgccccgactggagcgtgaaaccgcactc
atgaagtcagtcaccagtatcctaaaccgaggtggacgagtattgatgcccgtcttcgcc
ttgggacgggcgcaagagttactcctgattctggacgaatactggagccggcacccggac
ctgcagaaggtgccaatcttttatatcggaaacatggctcgaaggtgtatggtcgtgtac
caaacctacattggagctatgaatgacaacatcaaacggcttttccgggagcgcatggcc
gaagcggaagcaaagggggacaagagtacaactgctggcccgtgggatttcaaattcgtg
agaagtgtcagaaatctggagcgcttcgacgatgtgggcggatgcgtcatgctggcgtct
cctggtatgttgcagaccggaactagtcgcgaactgttggagcgatgggcccccagtgag
cgcaacggtgtcatcatgactggctacagcgtggagggaaccatgggcaaacagattctc
aatgaacccgagcagattccggcagtgatgagtgctagaaccggcattggcctaggccgc
ggccgaatacccgacggtgatgacgagcaaaaggtcatgatcccacgccggtgtacggtg
gaagagattagttttgcagcccatgtagatggcgtggaaaaccgtgaattcattgaagca
gtcgctgcacccgtcgtgatcctggttcacggtgaaaagcatcaaatgatgaggctcaaa
tctaaactcctcagtttaaacgcagaaaagacggtcaaggtcaaaatttactcgccctcc
aattgtgaagagattcgaattccgtttactgtggacaagattgccaaagtggtcggtcgg
cttgcagaaacctcacctcccactgcagactacgacgattcgcgactcatgaacggcgtg
cttgtgcaaaatgggtttcagctatcaatgatggcaccagaagacttgcgtgagtatgct
ggtttgacaacaaccaccatcacatgtaaacaacacatcacattaggaacagctagtata
gagctcatcaagtgggcgctggaaggcacctttggatcgatagaagaaattgggacgcag
cgtcgagagatgggcgccaacggccacacagccaaggaggaccacaacgcgaccgctgca
aaggaagaagcggacgaggaaattcccttcgatgaaaccgtcgcctatcttatcatgggc
tgcgttattcttaaatatagcccaaggaccaaggcgatcgagcttgagtgggagggcaat
ttgatgaacgacggagttgcggatgctgtgatggcggtcctcttgaccgtcgagagcagt
ccagccgctgttaaacgttcaagcaaaaagcaccatcatgcacaccacgcacccgaacta
ccaaatccccattcctatctcacccctgaagagcggtttgctcgtttgctgatgcttctc
gaagcacagtttggaccaaatattgcgccaatcgagagaccaaagattacccgaccctct
accaatcaccataccaatggaaccgcggccgccaaatccgaaccagacgcaagcgggcag
gatgcagaacggcagccagacgaggatgaagacattgaggacctcgaagaagcggaattg
gtccggctgcaggcgctcggcatcccggtcccggggattgagatcaaggtggacaagcac
gtcgcccgcgtgtggctggaaacgctggaggttgagtgcccgtacgccgtgctaagagac
cgggtacgagtggtggtggagcgtgcggtcgagactgttgcggatctatggagttccaag
gcggcctcacctcgaaaagctgacgtgcatggaaagactcgtgcaggagaggcggctgag
gtcggagtcgaactggaaatgaagcccgtattggctgtgaaaatgtga

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