Uncinocarpus reesii: UREG_03204
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Entry
UREG_03204 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ure
Uncinocarpus reesii
Pathway
ure03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UREG_03204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_03204
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_03204
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
UREG_03204
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
UREG_03204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
Pfc11_Clp1_ID
CID
zf_PCFS4
Zn_ribbon_ISL3
VHS
DUF7340
UBZ_FAAP20
Motif
Other DBs
NCBI-GeneID:
8439634
NCBI-ProteinID:
XP_002543687
UniProt:
C4JPN2
LinkDB
All DBs
AA seq
656 aa
AA seq
DB search
MSGLASDEVAEDYKNSLEDLTTNDKFQISNLTVIAKENTEHAMAISRVLENHIRTTPPSQ
KLPALYVVDSVVKNVGTPYTLFLGRNLYQTFMNAYTLVDSQTRKKLDEMLKTWKEPVPGS
LDPRPVFPVEITRSIENALIKARTAALQQQQARQQQDLRTWNRGVSTPPPAWKSVLTPPQ
GPAQQAQTNGQKPSDPYQARYTQTTPSQYPPITQQQQYGQSHPEIVDLASLHRDIDNLIM
SARNDFANRPLDSSVQQRLKALLDLQSILQQQKLPQEQLKLIRDQVSKLAIAAPPTPVPV
PAAPVPTTAVQTPSIPTLTTHTPPPNLQALLNPTTLASLIKATANSQNRTPPPPPPAPLA
QVFPQQAPASSSNTPSISAPVVTENPLIASLRARGLLPPVLNTPPQQPPANLPFLLPSQN
GYTPSTTPQLPTQTQTDIKISVQMSSASIKVPRPNLIFRLYEEKPNRCGTCGRRFAADDA
GKEKKARHLDWHFKTNLRMNEASKRGQSRSWYVDERDWIKSREYDDDVDITDAMAASAGK
SGGQDGAAQNAPQQRWIHAPNDAALRNTPCPICQEHFESTWSEEAQDWIWRDAIKVGNRV
YHASCYSELTKDGTTAAIAGSATPLGRTGTPDSVLGKRKAEVRLYGCFMMIATNGS
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgtctggactcgcctcggatgaagttgctgaggactacaaaaactctctcgaggatctg
acgacaaacgacaagttccaaatcagcaatttaactgtgattgccaaggaaaatactgaa
catgcgatggccatctccagggtactggaaaaccatatacggacaacccctccgtcgcaa
aagcttccagctctctatgtagtggactcagtggtcaagaatgtagggactccctacacc
ctattcttagggcggaacctttatcagaccttcatgaacgcatacacattagtcgattct
cagactcggaagaagttagacgagatgctgaaaacatggaaagaacccgttccggggtca
ttggaccccagacctgtgtttcctgttgagatcactcgcagtattgaaaacgctctgata
aaagcaaggaccgcggcgcttcagcagcagcaagcaaggcagcagcaggaccttcgcacc
tggaatcgcggagtttcaacgcctcctcctgcatggaaaagcgtgctgacgccaccacag
ggcccagcgcaacaagcccaaaccaatggtcagaaaccttcggatccttaccaagcgaga
tacacgcaaactaccccctcacaatatcctccaatcacccagcaacagcaatatggtcaa
tcgcacccagaaatagttgatttggcttccttgcatcgcgatatcgacaatctgattatg
agcgctcgaaatgattttgccaatcggccccttgattcttctgtccaacagcgacttaag
gcgctgttggatttgcaaagcattcttcagcagcaaaagttgccccaagaacagttaaaa
cttatccgcgatcaggtctctaaactcgcgatcgccgctcctcctacccctgttcccgtg
cccgcagctccagtccctaccacagccgttcagacgccgtccatccccacattaacgact
cacactccgccaccaaatctacaagccttattaaaccccactacactcgcaagtttgatc
aaagctactgcaaattcgcaaaatcgcacgcctccccctcctcccccggcgccgctggct
caagttttcccacaacaagcccctgccagctcatccaatacaccttcgatttcagctcct
gtagttacggaaaatcctttaatcgcttcgcttagggcccgcggccttcttccaccagta
ctcaacactccccctcagcaaccacccgccaacctcccatttctacttccaagtcagaat
ggatacacgccaagtacaacgccacagttaccaactcaaactcaaactgatattaagatt
agtgtacagatgagttcggcatctatcaaagtccctcgtccaaaccttattttccgccta
tatgaggagaagccaaatcgctgtggaacatgcggtcgtcgttttgcagctgatgatgca
gggaaagagaaaaaggctcgtcatctggactggcattttaaaactaatttgcgtatgaac
gaagcatctaagcgtggccagagtcgcagttggtatgtggacgaaagggattggatcaaa
tctcgagagtatgatgatgatgttgatataacggatgccatggccgcttcggccgggaaa
tcagggggccaagatggagccgcgcaaaatgcaccccaacaacgatggattcatgcgcca
aacgacgcagcccttcggaacacaccgtgtcctatttgccaggagcactttgaatcaaca
tggtcagaggaagctcaggattggatatggagggatgcgattaaagtgggtaatcgtgta
tatcatgctagttgctattcagaactcacgaaggatgggacaactgctgctattgccggc
tccgcgacgccacttgggaggaccggaacacctgattctgtgctagggaagagaaaagcg
gaggtaagactttatgggtgctttatgatgattgcaaccaatggatcctaa
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