KEGG   Uncinocarpus reesii: UREG_03484
Entry
UREG_03484        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K12880  THO complex subunit 3
Organism
ure  Uncinocarpus reesii
Pathway
ure03013  Nucleocytoplasmic transport
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_03484
  09122 Translation
   03013 Nucleocytoplasmic transport
    UREG_03484
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_03484
   03041 Spliceosome [BR:ure03041]
    UREG_03484
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     UREG_03484
Spliceosome [BR:ure03041]
 Complex C
  Other components
   EJC/TREX
    UREG_03484
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    UREG_03484
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40 Beta-prop_WDR5 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR75_1st WDR55 WD40_Gbeta Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Cytochrom_D1 DSE1_N Beta-prop_NOL10_N WDR90_beta-prop_4th Beta-prop_EML CFAP251_N Beta-prop_WDR36-Utp21_1st Tricorn_2nd TP_0598_N Beta-prop_TEP1_C PAC11 WD40_RFWD3 Beta-prop_WDR41 Beta-prop_ACSF4 Beta-prop_Nup120_160 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 ASA1 PALB2_WD40 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 8442058
NCBI-ProteinID: XP_002543967
UniProt: C4JR02
LinkDB
AA seq 362 aa
MPPAPPSQLIPKDRFSYLFGRLRTQSYTDPNARGPGSHSIRTLAWNPTGLLIATGSADRT
LRIWNPERPEWRYSTELRGHSSGIEQVAFNPVKESELASCSTDGTVRFWDVRSKSCVSRI
DVGGEAFTLSWAADGSALLVGRMDDTLVPISVDSTSSPIIKPPTTETAKGTLSSPLYKSL
PPHKQPVRTNGTAFSYSASNPDLFLTTGDGTVQVVTYPSFTPLHTLNAHTAACLCVSLSP
TARYLAIGGGDSLISLWDTTDWICKRTVSSAGGGAVRGISWSWDGRFIVGACEEHDCAGV
GLEIFHAETGDSVFTVPTDASHVVPAVAWHPSRYWLAYSVYADGLGASSNGLRIVGAAGG
GL
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgcctcctgctcctccgtcccagctgattcccaaggaccgattcagttatctgttcggg
agattaagaacccaaagctatacagatcccaacgcgcgcgggcctggctctcacagcatt
cgtactctagcatggaatcctactggccttttgattgcaacgggctctgccgaccgtaca
ctacgtatatggaatcctgagcgcccggaatggaggtattcgaccgagttacgcggacat
tcctccgggatcgagcaggttgctttcaatcccgtcaaagagtctgagctggcgagctgc
tcgactgacggaactgttcgattctgggacgtgcgatccaagagttgcgtcagtcgcatt
gacgtgggcggagaggcgtttactctctcgtgggctgccgatggcagtgcgcttctcgta
ggaagaatggatgacaccctagtcccgatatcagtcgactctacatcctcgccaatcatc
aagccacccacgaccgaaaccgccaaaggaacactatcgtcaccactctacaaatccctc
cctccccacaaacaacccgtccgcaccaacggcaccgcattctcctactccgcctccaac
cccgacctcttcctcaccaccggcgacggcacggtccaagtcgtcacctacccatccttc
acccctctccacaccctcaacgcccacaccgcagcttgtctgtgcgtctccctctctcca
acagcccgctacctcgccatcggcggcggcgactctttgatctccctctgggacaccacg
gactggatctgcaagcgcactgtgtcaagtgcgggcggaggcgccgtgcgcggcatcagc
tggagctgggatggacgattcatcgtcggtgcctgcgaggagcacgattgcgccggggtg
ggactggagattttccatgcggagacgggggatagtgtcttcaccgttccgacggacgcg
tcgcatgttgttccggcggtggcgtggcatccgtctaggtattggttggcctactcggtg
tatgcagacggtttgggggcgagcagtaatgggctgcggatcgtgggcgccgccggtggc
gggctgtga

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