Uncinocarpus reesii: UREG_03484
Help
Entry
UREG_03484 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K12880
THO complex subunit 3
Organism
ure
Uncinocarpus reesii
Pathway
ure03013
Nucleocytoplasmic transport
ure03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UREG_03484
09122 Translation
03013 Nucleocytoplasmic transport
UREG_03484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_03484
03041 Spliceosome [BR:
ure03041
]
UREG_03484
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
UREG_03484
Spliceosome [BR:
ure03041
]
Complex C
Other components
EJC/TREX
UREG_03484
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
UREG_03484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_WDR75_1st
WDR55
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Cytochrom_D1
DSE1_N
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_EML
CFAP251_N
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
TP_0598_N
Beta-prop_TEP1_C
PAC11
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_Nup120_160
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
ASA1
PALB2_WD40
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
8442058
NCBI-ProteinID:
XP_002543967
UniProt:
C4JR02
LinkDB
All DBs
AA seq
362 aa
AA seq
DB search
MPPAPPSQLIPKDRFSYLFGRLRTQSYTDPNARGPGSHSIRTLAWNPTGLLIATGSADRT
LRIWNPERPEWRYSTELRGHSSGIEQVAFNPVKESELASCSTDGTVRFWDVRSKSCVSRI
DVGGEAFTLSWAADGSALLVGRMDDTLVPISVDSTSSPIIKPPTTETAKGTLSSPLYKSL
PPHKQPVRTNGTAFSYSASNPDLFLTTGDGTVQVVTYPSFTPLHTLNAHTAACLCVSLSP
TARYLAIGGGDSLISLWDTTDWICKRTVSSAGGGAVRGISWSWDGRFIVGACEEHDCAGV
GLEIFHAETGDSVFTVPTDASHVVPAVAWHPSRYWLAYSVYADGLGASSNGLRIVGAAGG
GL
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctgctcctccgtcccagctgattcccaaggaccgattcagttatctgttcggg
agattaagaacccaaagctatacagatcccaacgcgcgcgggcctggctctcacagcatt
cgtactctagcatggaatcctactggccttttgattgcaacgggctctgccgaccgtaca
ctacgtatatggaatcctgagcgcccggaatggaggtattcgaccgagttacgcggacat
tcctccgggatcgagcaggttgctttcaatcccgtcaaagagtctgagctggcgagctgc
tcgactgacggaactgttcgattctgggacgtgcgatccaagagttgcgtcagtcgcatt
gacgtgggcggagaggcgtttactctctcgtgggctgccgatggcagtgcgcttctcgta
ggaagaatggatgacaccctagtcccgatatcagtcgactctacatcctcgccaatcatc
aagccacccacgaccgaaaccgccaaaggaacactatcgtcaccactctacaaatccctc
cctccccacaaacaacccgtccgcaccaacggcaccgcattctcctactccgcctccaac
cccgacctcttcctcaccaccggcgacggcacggtccaagtcgtcacctacccatccttc
acccctctccacaccctcaacgcccacaccgcagcttgtctgtgcgtctccctctctcca
acagcccgctacctcgccatcggcggcggcgactctttgatctccctctgggacaccacg
gactggatctgcaagcgcactgtgtcaagtgcgggcggaggcgccgtgcgcggcatcagc
tggagctgggatggacgattcatcgtcggtgcctgcgaggagcacgattgcgccggggtg
ggactggagattttccatgcggagacgggggatagtgtcttcaccgttccgacggacgcg
tcgcatgttgttccggcggtggcgtggcatccgtctaggtattggttggcctactcggtg
tatgcagacggtttgggggcgagcagtaatgggctgcggatcgtgggcgccgccggtggc
gggctgtga
DBGET
integrated database retrieval system