Uncinocarpus reesii: UREG_03648 Help Entry UREG_03648        CDS       T01132                                  Name (RefSeq) ATP-dependent helicase NAM7   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism ure  Uncinocarpus reesii Pathway ure03013   Nucleocytoplasmic transport ure03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:ure00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     UREG_03648    03015 mRNA surveillance pathway     UREG_03648  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ure03019]     UREG_03648 Enzymes [BR:ure01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      UREG_03648     5.6.2.5  RNA 5'-3' helicase      UREG_03648 Messenger RNA biogenesis [BR:ure03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      UREG_03648    mRNA cycle factors     Common to processing body (P body) and stress granule      UREG_03648 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  UPF1_Zn_bind AAA_12 AAA_11 UPF1_1B_dom AAA_30 AAA_19 ResIII DEAD NPHP3_N Helicase_RecD PIF1 nSTAND3 SLFN-g3_helicase AAA_16 UvrD-helicase PhoH ATPase AAA_22 Ribosomal_S13_N AAA_25 AAA_32 Motif Other DBs NCBI-GeneID:  8443781 NCBI-ProteinID:  XP_002544131 UniProt:  C4JLE0 LinkDB All DBs AA seq 1075 aa AA seqDB search MSTVDGDENILKMAGGPRRRQHDDDDDGSEVYDEDEDDDLESLASVAVDGSAKTPATKAE EDRQLPPHACCYCGIHNTNSVVKCLACNKWFCSARGNTSSSHIVNHLVRARHKEVQLHPA SAAGDTVLECYNCGTRNVFLLGFIPAKSDTVVVLLCRQPCAAMPSSKDMNWDTSLWQPLI EDRSFLSWLVGTPSDQEQLRARHLSPQMIAKLEEIWKENSSATVEDLEKATGVDDEPAPV LLRYDDAYQYQNVFGPLVKIEADYDRKLKEAQSQDGLIVKWDLGLNNKHLASFVLPKLEL GDVKLAVGDEMRIKYSGELRQKWEGVGYVVKIPNNQSDEVTIELRTKGDHKSVPTECTHN FTADYVWKSTSFDRMQTAMKTFAVDEMSVSGYIFHRLLGSEVAAAPMKTQLPKKFTAPGL PGLNPSQVNAVKAVLQKPLSLIQGPPGTGKTVTSATVIYHLAKLTGGQVLVCAPSNVAVD QLCECIHRTGLKTVRVTAKSREDVESPVRHLSLHEQVRNNDSNVELMKLTQLKNELGELS SQDEKKFKQLTRAAEKEILTNADVICCTCVGAGDPRLAKFKFRTVLIDESTQSSEPECMI PLVMGCKQVVLVGDHLQLGPVIMNKKAAKAGLNQSLFERLVILGCAPIRLNVQYRMHPCL SSFPSNMFYDGSLQNGVTSDDRLLKDVDFPWPISDKPMMFWSNLGNEEISASGTSYLNRT EAANVEKIVTRFFKAGVKPSAIGIITPYEGQRSYVVSSMQLNGTYKKEAYKEIEVASVDA FQGREKDFIVLSCVRSNDHQGIGFLSDPRRLNVALTRAKYGLVILGNPKVLSKHPLWNYL LRHFKEQDCLVEGPLSNLQTSLVQFSRPKQAYRGPQRFQMAYHHASSMASGLMNGRNGQH SDYQDSGSVASYIPDDVSSVHSSALGGVAIPPGYPQMFQNFSDMWPQLPHNRRANGARAR GAPSVAGESVAATESDATASMIDGRSVGQGGVSLSGLSIHDVHRQASLSQSDRLKHYVES SGRGEPYRGNETTSVFGGSSASMRVPRGNASLATDDDDARSISTAFASQIGGTYD NT seq 3228 nt NT seq  +upstreamnt  +downstreamnt atgtctacagtcgacggcgacgaaaatattctgaaaatggctggtgggccacggagacgg cagcatgacgacgacgacgatggctcggaagtgtatgatgaggatgaggatgatgatctg gaaagccttgcaagtgttgcggttgatggtagtgcgaaaacacccgccaccaaagcggaa gaagacaggcagctccccccgcatgcgtgctgttattgcggaatacataataccaacagc gtggtcaaatgccttgcctgtaacaaatggttctgtagtgctcgtgggaatacatcctcg tcgcacattgtgaatcatcttgttagagctcgacacaaggaagtccaactccatcctgca tccgcagcaggtgacactgtgcttgagtgttataactgcggtacacgaaatgtttttctc ttaggctttattccagccaaatctgacaccgtggttgtcttgctgtgccgtcagccctgt gcagcaatgccgtcctccaaagacatgaactgggacacctctctctggcagccactgatc gaggatcgttccttcttgtcctggcttgtaggcaccccttcggaccaggaacagctgaga gcgcgccaccttagcccgcagatgattgcgaaactagaggaaatatggaaagaaaactcc agcgcgacggttgaagatttggaaaaagcgactggtgtcgatgacgagcccgcgcctgtc ttactccgctacgatgatgcgtatcaataccaaaatgtctttgggcctctcgtgaaaatc gaggcagactacgaccgcaaattaaaggaagcccagtcacaggatggattgatagtcaag tgggaccttggattgaacaacaagcatttagctagctttgtgcttccaaagctggagctt ggtgatgtgaagctagctgttggtgatgaaatgcgaattaaatactcaggggaattgcga caaaagtgggaaggtgtcggctatgtcgttaaaatccccaacaatcagtccgatgaggtt actatcgaacttcggaccaaaggcgatcacaaatcggtccctacagaatgcactcacaat tttacggccgattacgtttggaaatcgacgtctttcgacagaatgcaaaccgccatgaag acatttgcagtggatgaaatgagtgtttcgggatatatctttcaccggctcttgggaagt gaagtcgctgccgcaccaatgaagacccagctgcccaagaaatttacagcaccgggtctt ccaggcttgaacccaagtcaagtcaatgcagtcaaggctgtccttcagaagcctctgagc ttgatccaaggcccgcctggtacgggcaaaaccgttacttcggcaacggttatctaccat ctagcaaagcttactggtggacaggttctggtttgcgcaccatctaatgtagcggttgat cagctctgcgaatgtattcatagaaccggcctcaagacagtccgcgtcactgccaagtct agagaagacgtcgagtcgcctgttcgccatctttctcttcacgaacaagttcgcaacaat gacagcaatgttgagctaatgaaacttacacaattgaaaaacgaactcggagagttgtcg agccaggatgagaagaaattcaaacagcttacgcgtgctgcggaaaaggaaatattgacg aatgcagacgttatttgctgtacctgcgttggtgctggagaccctcgacttgcgaaattc aaatttcgaacagtcttgattgacgaatccacgcaatcatcggagcccgaatgtatgatt ccattggtgatgggatgtaaacaagtcgttctcgttggtgaccacctgcaacttgggccg gttatcatgaacaagaaagctgcaaaagcgggcttgaaccagtctctttttgagcgcttg gttattctgggctgcgctcctatccggctaaacgttcaatatcgaatgcatccctgtcta tctagtttcccatccaacatgttctatgatggctctctacaaaacggtgtgacaagcgac gaccgcctattgaaagatgttgatttcccgtggcctatttcagataagcccatgatgttc tggtcaaaccttggcaacgaagaaatttctgcatccggaacgtcgtatctcaatcgtact gaggctgcgaacgtcgaaaagattgttactcgatttttcaaagccggcgtgaagccgtct gccattggtattatcacgccttatgagggacagcgcagttatgtggtcagctccatgcaa ctcaacgggacatataagaaagaagcctacaaggagatcgaagtagcttcggtggacgcg ttccaaggtagagagaaagactttatcgtgctttcatgtgtccgatcaaacgaccatcag ggtattggattcttgagcgacccgcgtcgtctcaatgtggcgcttacgcgagccaaatac ggccttgtaattttgggaaatccaaaagttctttcgaaacatcctctctggaactacctt ctccgtcacttcaaggaacaggattgcctggtggaggggccgttgtcgaacctccagact tcacttgtgcagtttagtcgcccgaagcaggcataccgtggtccccagcgtttccaaatg gcgtaccatcacgcttcgagcatggcctccgggttgatgaatggtcgaaatggacagcat agtgactatcaagattccgggtctgttgctagctacattccggacgacgtctcctctgtg cattcctctgccttgggtggtgtcgctatcccgcctggctatccgcaaatgttccagaat ttcagcgacatgtggccgcagcttccgcataaccgtcgtgcgaacggcgctcgagcgaga ggagcacccagtgtggccggcgagtctgtggccgcgacggaatccgacgccactgcaagt atgatcgatgggcgaagtgttggtcaaggaggcgtcagtctcagcggcctcagcattcac gatgtgcacagacaggccagcctcagccaatctgatcgactaaagcactatgttgaatcc agcggccgtggggaaccctacagaggaaacgaaactacgagtgtgtttggtggcagttcg gcgagcatgcgcgttcctcgtggcaatgccagccttgcaaccgacgacgatgacgcccgt agcatttccaccgcatttgcaagccaaattggaggcacgtatgactga

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