Uncinocarpus reesii: UREG_04156
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Entry
UREG_04156 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K15176
RNA polymerase-associated protein CTR9
Organism
ure
Uncinocarpus reesii
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_04156
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
UREG_04156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_19
TPR_8
TPR_14
TPR_12
TPR_17
TPR_16
TPR_7
TPR_10
TPR_6
TPR_11
TPR-S
Motif
Other DBs
NCBI-GeneID:
8437168
NCBI-ProteinID:
XP_002544639
UniProt:
C4JMU8
LinkDB
All DBs
AA seq
1117 aa
AA seq
DB search
MASVRNGYVNGTTVAVENAIDAFSAKPRFSDIPSAIDIPASSFDTEVEISLEELPEDPTE
LCTLLDNEQASKNFWVIIALAYAKHNQLDLSIEILNRGIASLPHGASNEKLGLLSWICWI
YLLKSRQAPRVAPEGQLLSEARTKDYYLQAATATVNEAYRLNPAFPPFFLARGVLSLLRA
SLQPPAKAVVQGRTTCSDESKVANILLAAYYLHDSSRHSTTDPSFGSLYKLAMTQYTQKA
FKLDKEYPMTCAMFGGYFLLRRHFPTVEALARKAIELTDVNAIASDGWYLLARKEHEEGD
PAKAQEYYNRADQARGGSDKGYLPAKFGAVQMQIRSQDKDGAKFRLEKIVQQKKNPEAMT
LLGSLYAEEVFEVANSANKEDKSAEIKKATSLLEAVRASWKDEKKKISPDISVLLYLARL
YETTAPEKSMQCLSQIEQIQLAQIPDSDKPDDVEGEEAMTNILRERLAPQLLNNMGCFLY
QADKIEQARNMFQTALNACVKTQEKDDGTDTDALVTTISYNLGRTYEAAGLPEEAEKVYE
GLLKRHGDYSEANARLTYMSLRQSPTDEGPKKMAKLYEADATNLEVRALFGWYLNKSKRR
TANIAEDHEQRHYKHTLLGYDKHDRYALTGMGNVHLMAARDMRRDGEQDRERRRKMYDRA
VEFFDKALQLDPKNAYAAQGIAIALVDDKKDFSTAVQIFSKVRDSIRDASVYLNLGHVFA
ELRQFSKSIENILSCLGRVWFLKGKQERSIASMKTALEYAQRARSVAPEQKHLDFNLAFV
QNEIAHLASNLPETQKTSQEIEEALGGLEEAVATFEKIAKAPNPPYPPISLEQRANMIKN
TTINQLQRALQSQKEYEEKNAAKLQQAREAREAEQKRREEERRKLEEAEAERKRQIAEER
QRMVEEAQRLAAIRTEEEKAREAAEYTTDSETGDKIKRKKRPSGAKRKKKGEDGEERETS
RKSRAKSTTSSRTPATSDAEDQPAPRKRRRLGRRSTAKSNKYKSSEIVVESETDEGEAVP
TPDEDQPIEKAEDEEMGDVGDAEQEDEDAMVSRRRKKVNLRIEDEEDEDEDEGDVAPAPA
DEQDDLFGEKSASEENEAKAGGDADLDTEMRDQGDED
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgttcggaatggctacgtaaatggcaccactgtcgcagtggaaaatgcaatt
gatgcattttcagcgaaacctcgattctccgacatcccttcggctatcgacattccggcg
tcctcgttcgacaccgaagtcgaaatcagccttgaagaactccccgaagatcccaccgag
ctctgcaccctccttgacaacgaacaagcttcgaaaaatttctgggtaataatcgcactc
gcttatgctaaacataaccaacttgacctctccatcgagatcctcaatcgcggaatcgca
tccttgcctcatggcgcgtcaaatgagaagctcggccttctgagctggatatgctggata
tacttgcttaagagcagacaagcccctagagtcgctccggaggggcagttactctccgaa
gctagaacaaaagattattatctccaagccgctacagccactgttaatgaagcttatcga
ttgaatccagcttttccaccgtttttccttgcccgcggcgtcctatccctcttacgcgcc
tcattacagcctccagctaaagcggtcgtgcaagggcgtactacatgctcggacgagtcg
aaagttgccaatatcctccttgcagcgtattatcttcacgatagctcgcgccattcgacg
acggacccttcctttggttccttatacaaactcgccatgacccagtacacccaaaaggct
tttaaactcgataaggaatacccgatgacatgcgctatgttcggtggttatttcctcctc
cgcagacatttcccgacagttgaggcactcgcaagaaaggctattgaactcactgatgtc
aatgccatagctagtgatggctggtatttgctagcgcgcaaagaacatgaggaaggtgat
ccagcgaaggcgcaggaatattacaaccgtgccgaccaggcaagaggcggttccgacaag
ggatatctacccgctaaattcggcgcggtacagatgcaaattaggtcacaagataaagat
ggcgcgaaattcaggcttgagaagatagttcagcaaaagaaaaatccggaggcaatgact
ttgctgggctctctttacgctgaagaggtcttcgaagttgcaaacagtgccaacaaggaa
gacaaatccgcggaaatcaagaaagccacgagcctacttgaagctgttcgcgcctcgtgg
aaggatgaaaaaaagaaaatatcccctgatatatctgtcctgctttatcttgcccgtttg
tacgagacgactgcccctgaaaaaagcatgcaatgcctttctcaaattgagcaaatacag
cttgctcagattcctgattcagacaagccagacgatgtggaaggcgaggaagctatgact
aatatcctccgagaacgcctagctcctcagctactgaacaacatgggctgctttctctat
caggccgacaaaattgaacaagctagaaatatgttccaaactgccctcaatgcatgcgtg
aaaacgcaggagaaggacgatggaaccgatacagacgcgcttgtgactactatcagttac
aatcttgggcgtacctacgaggccgcagggttgcccgaagaagccgaaaaagtgtacgaa
ggacttttgaagagacatggagattattccgaagccaatgctcggttgacgtacatgtcc
cttcgtcaaagcccgaccgatgaaggcccaaaaaaaatggcgaagctttatgaagcagat
gctaccaacttggaggttcgagctctttttggatggtatctcaacaagtctaaacgccga
actgcgaatatcgcagaagatcacgaacagcgccactataaacatacccttctagggtat
gataaacatgatcgatacgctttgaccgggatgggtaacgtacacctaatggcggctcga
gatatgagacgagatggggaacaagatcgagagaggcggagaaagatgtatgatcgagcg
gttgaatttttcgataaagctcttcagttggatccgaagaatgcatatgccgcccaggga
atcgcgatcgcactagtcgatgacaagaaagatttctcaaccgcagttcagatattttct
aaagttcgcgactccatacgtgacgcaagcgtttacctgaacttgggtcacgtctttgca
gaattgagacagttttcaaagtctattgaaaatattctttcctgccttggtcgtgtatgg
ttcctcaagggtaaacaagagcgaagcatagcttcaatgaagacggctttggaatatgcc
caacgcgctcgttctgttgcgcctgagcagaaacatcttgacttcaaccttgcgtttgtg
caaaacgaaatagctcatctcgcatcgaatcttcccgagacacaaaagacttctcaagaa
atcgaggaagctctaggtgggcttgaggaagctgtggcgacttttgagaaaatcgccaaa
gcaccaaatcctccctatccaccgatctcgcttgaacagagagcaaacatgatcaaaaat
acgaccattaaccaacttcagcgcgctttgcagagtcaaaaagagtatgaagaaaagaac
gccgcaaagttgcaacaggcaagggaggctcgtgaggctgaacaaaagcgaagggaagaa
gagagacgtaaactcgaagaggcggaggcagaaaggaaacgccagatcgctgaagaaaga
cagcgaatggtcgaagaggcccaacggctcgcagccattcgtacagaagaggagaaagcc
agggaagctgccgagtacaccacagattccgaaactggggacaagattaaaagaaagaag
cggccttcgggggccaagcgaaagaagaagggggaggatggagaggaacgagagacatcg
agaaaatcgagggctaaaagcaccactagttctcgcacacccgccacttctgacgctgaa
gaccagcctgccccaaggaagaggagacgcctgggaagaagatctacagccaagtcgaac
aagtacaagagtagtgaaattgttgttgaatccgaaactgacgagggagaagcggtgcca
actccggatgaagaccagcccattgaaaaggcagaagacgaagaaatgggagacgtggga
gatgctgagcaggaagacgaagatgcgatggtttcgcgaaggcgtaagaaggtcaacttg
cgaatcgaggacgaagaggatgaggatgaggacgagggtgacgttgcgcctgcaccggca
gacgaacaagatgatttgtttggtgagaaatcggccagcgaagaaaacgaggcgaaggct
ggtggagatgcagacctggacaccgaaatgcgagaccaaggagacgaggactga
DBGET
integrated database retrieval system