Uncinocarpus reesii: UREG_04516 Help Entry UREG_04516        CDS       T01132                                  Name (RefSeq) hypothetical protein   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism ure  Uncinocarpus reesii Brite KEGG Orthology (KO) [BR:ure00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:ure03021]     UREG_04516 Enzymes [BR:ure01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      UREG_04516     5.6.2.5  RNA 5'-3' helicase      UREG_04516 Transcription machinery [BR:ure03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      UREG_04516 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  SEN1_N AAA_11 AAA_12 SEN1_barrel UvrD-helicase AAA_19 Viral_helicase1 AAA_30 DEAD zf-CCHC ResIII nSTAND3 Med9 AAA_22 ATG14 Motif Other DBs NCBI-GeneID:  8442381 NCBI-ProteinID:  XP_002544999 UniProt:  C4JPD4 LinkDB All DBs AA seq 2153 aa AA seqDB search MADLLRALGEIKALPDDLHLLCPRQDADDISPYKEREVDRERCKKKDEEACKRLAKIREA KEEARLRREKLLSCMPLLAFSEPELVEHQTWIWDRLQRSLESCELCIMEYYKAKSWLWET LREHYDESEVEKFGKMLDDWDIRRIIGHLDAASKILGGLDPSERSPRVLDRPILCSFFEA LNCEALLKRDAEFRQHFDEPFKLVQTHQRLRIAEYVPGLTRFLFDADPLRNKWAVIAWEK ISEPLAEEDFEQAVKEPLMSVLYQAICVPYQPDLVERLWRGLYLVVQKCNEVIITHNLRA LEIDICRVSVDHLEVPASCLRPLLNTIRILLEKAPKGFWDAMQTIPPQAILERIFHNPQY DRFLREAAEDEPFDVSALKDMLIFMGPFVSSLLDAHRPQACRFLIDQLLTRLQGPEFPDW VKYYCNQAGLSVILLLVRSFTDNASARSSVATIVLSETLEIVTKQIDIIFNPPRFTIQGK SNDLTSLCADVVRNVLAFECQSLRADYEMILENKSMQQNVSTYTPLVWDQVVRHLHEGNV ALSRAALIGLYPLPGLEKFPTRGEHNTEKTHYNTMYGHITHCFCQVLERLADFKPEHLDQ LFQDSTTPLAPISALFSADLNTYQAAVDLIKAVSGQSGRKEAISHLFQAFWAPTLYAFCW SYRRIAKMKTFASAPRMVKTGTDIIDVLCDTQTGILRTRKLADDTEIGSLQKLWEYQWAG LVTIFNETEAWHRTGVERNIMMEFCRDTMQFADLLFDQFPIFVTAIVESKARMSQSASEV LLKAPTRSLSGMVKWLRLKDEYLATTLGGLVVKLLRRLGELNVELPQDALDFIRAVAVTS EIKTILTQREKAELVRALEAYYGEPSATAQAAPAVTKKQTKIMDFAKPVDKSAATTPKES TEDEFNDDIPDDYILQLSSSVELNKARLAALPKKPEKRVPAAPKPIVKPLLAHNVQSFRE KREKEREEKRRRDKLEADRRKKNLAFLGVAEQTMAQGSGLDSITANVIEPKPADSMMVSQ TTSESESDDEDEGTLGQKAPTKPDAVRAYEESKKMRLQQRMPVKKIKVARSAKDMRARLS PDLTLLHKTLLSWDFFATGDLPPNCGRTDYTLVSNTFADALEYQRTFEPLLILEAWQGFQ SDKEDGTFKAFEIKVANRVSVDNFVEVSTSMAPQTVKDFGLGEADIILLSKSSNPATDKQ APHCLARVSGLVKKRGQMEITFRVNPMNPLINAISPGASLYSIRISSLTPLEREYGALMA LRYYDLSDEIIRAKPSPILNYSAEAVKNILNTYNLNLAQSKAVKSAIDNDAFTLIQGPPG SGKTKTIVALVGALLSNTLSEHRIAPPRPGDKTARSMAKKLLVCAPSNAAVDELVMRFKE GVKTLYGRSQNISVIRLGRSDAINANVLDVTLDELVNAKLSQAGQKNGNERDLQSLYTEH KETSNKFNEIRERLDQCRAKGQAVPNELDREFDLLKRKRAQLSQAIDSARDKNQAAARNA ELTRRKIQQEIIDGAHVICATLSGSGHDMFQTLSIEFETVIIDEAAQSIELSALIPLKYG CSKCILVGDPKQLPPTVLSKEASRFQYEQSLFVRMQANHPQDVHLLDTQYRMHPEISRFP STAFYDGRLQDGPDMARLRMRPWHNTSLLGPYRFFDVQGMHASAPKGHSLVNLAELRVAM RLYERLIADFPTYDFSGKIGIITPYKGQLRELKQQFANKYGNAIFKAVEFNTTDAFQGRE CEVIIFSCVRASSHGIGFLADIRRMNVGLTRAKSSLWVLGNSQSLVRGEFWRGLVKDARE RNLYTDGDVYKLLQTPQKLLEPNDIEMVDAPPDSIPGSDLPSRPASAMTGGTGGSRPSSR LSGSRFSVGNETPTNLSMDDTPSRSAMSTPVQPLDIPGGGGNGLNEKLACGYCGSLLHIS QNCDNFEAKSISQGTCFRCRKEGHSKRDCTAIRCVECGMFGHSAEACKSTQVLSKSAKDR IMRDELQFKLLQKRNVERRKERQLGDHDPKVPKIQVAPTVSTPGPHGSPQNGPNVTDIAG KRKRGSLDLPDTKGAKVPRSNRDGPVPNAPRGPKGKRIDPHSVAPPASDLVVPSKDRAGH RPIDAKTHDKLAGPGHNVNSSSVAQPAAPPKRVDRPPFRKKKPVDPFIRPKRR NT seq 6462 nt NT seq  +upstreamnt  +downstreamnt atggccgacttgctcagagctctcggggagattaaagcgttgccagacgatcttcaccta ctctgcccccgccaggatgccgacgatatatcgccgtacaaggagagagaggtcgatagg gaaagatgcaagaagaaggacgaggaagcgtgcaaacgactggcgaaaatacgagaggca aaagaagaggcgagattacgtcgagaaaaactcctgtcctgcatgccattattggctttt agtgagccggaactggtagaacatcagacttggatttgggatcgtctccagcggagcctt gagagctgtgagctctgcatcatggaatattacaaggccaagtcgtggttgtgggaaaca cttcgagagcactacgatgaaagtgaggtcgaaaagtttggaaagatgctagatgattgg gacatacggcgcattattggacatttggatgcagcgtctaaaatcctgggtggacttgat ccatctgaaaggtcaccgagggttttggataggccgatattgtgctcctttttcgaggca ttgaactgcgaagcgctattgaagcgagatgccgagtttcgacaacatttcgacgaaccg ttcaaattggtccaaactcatcagcgcttgcggatcgcggagtatgtgcctgggctgacg cggttcctgttcgatgcggatccccttcgaaacaaatgggcagtcattgcttgggagaag atatccgaaccattggcagaagaagatttcgaacaggcagtcaaagagccgcttatgtct gttttataccaagcgatttgtgttccttaccaaccagatcttgttgagagattatggcgt gggttatatctagtggttcaaaaatgcaacgaggtaatcatcacccataacctacgggca cttgaaatcgacatctgccgagtatcagtcgaccaccttgaagttccggcttcatgcctt cggcctctgctaaatacgatacgcatcctccttgaaaaggccccgaaagggttctgggat gctatgcagacaatcccgccgcaagctatcctcgaacgcatcttccacaatccacagtac gaccggtttttacgggaagctgccgaagatgagccgtttgacgtgtcggctttgaaagac atgttaatctttatgggaccatttgtgtcttcgcttttagatgctcacagacctcaggca tgccgatttttaatagaccagctccttacccgcctgcaagggccagaatttccagactgg gttaaatattactgcaatcaagcaggcctgtcggttatacttttattggtgagaagcttc accgacaacgcctccgccagaagttccgtggctaccattgttctgtccgaaacgctagaa attgtcacgaaacagattgatatcatatttaacccccctagatttaccattcagggcaaa tcgaatgatcttacatccctctgtgccgacgtcgtgcgaaatgtcctggctttcgaatgt caatcccttcgagctgattacgagatgattctcgagaacaaaagcatgcaacaaaatgtc agcacgtatactccgcttgtctgggaccaagtcgttaggcacctccacgagggcaatgtc gcgttatcgcgtgcagcattaatcggcttatatccccttcctggtctagaaaaattccca actagaggcgagcataatacagaaaagacccattacaataccatgtatggccatattacg cattgcttttgtcaggtattagaacggctggcagacttcaagcccgaacaccttgatcag ctatttcaggattctacaacgcctttagcgccgatatcagcactattttccgcagatttg aatacgtatcaggccgctgttgaccttatcaaagcagtcagtggtcaatctggacggaaa gaagcaatctcgcatttgttccaagccttttgggctcctacgttgtacgcgttttgctgg tcgtatcgtcgaattgccaaaatgaaaactttcgcatctgcaccgaggatggtgaagacc ggaacggacattatcgatgtactgtgcgacactcaaacagggatcctaagaactcggaaa ctggccgacgatactgagattggctctcttcagaagctctgggagtatcagtgggcgggc ctagttacaatattcaacgagacggaagcatggcatagaacgggagttgagagaaacatc atgatggagttttgtcgcgacaccatgcagttcgcagatttgcttttcgaccaattccct atattcgtgaccgctattgttgaatcaaaggcgcgaatgtctcaatctgccagtgaagtg cttctcaaggcgccgacaaggtcattgagtgggatggttaaatggcttcgcctgaaggat gaatatcttgccacgactttagggggattagtggtgaagcttttgcgccgcctaggagag ttgaatgtcgaattaccacaagatgcgctagattttatacgagctgtggcagtgacatca gagattaagacgattttaacgcaacgagagaaggccgagctcgttagagcgttagaggct tactatggagagccctctgcaactgcacaggccgcgcccgcggttactaagaagcagacg aaaataatggatttcgcaaaacctgtggataagtctgctgcaaccacccctaaggaatcg acggaggatgaattcaatgacgatattccggacgattacatcctgcaactttcatcgtct gtagaacttaacaaggcaagattggctgcactgcctaagaagcccgagaagcgagttccc gcagcacctaagccgatcgtgaagcccctattagcgcataatgttcagtccttccgggaa aaacgagaaaaagagagggaagaaaagagaagacgagacaagctagaagcagatcgccgt aaaaagaatcttgcttttcttggtgttgccgaacaaacaatggcccagggctctggcctt gactcaattactgccaatgtcattgaacccaaaccggctgatagtatgatggtttcccag actacctctgagtcggaaagtgatgatgaggatgagggaacgctaggacaaaaagcacct acaaaaccggatgctgttagagcgtatgaagaaagtaagaaaatgcggttacagcagcga atgcctgtcaaaaagatcaaggtggctcgctcagcaaaggatatgagggcaaggttgtct ccggatctgacactgcttcataagactttgctaagttgggacttctttgcaactggtgat ctccctccgaattgtgggcgaacggactatactcttgtttcgaatacttttgcagatgcg ttggaatatcagaggacattcgagccacttctgattctggaagcatggcaaggattccaa tccgacaaagaagacggcacgttcaaagcgttcgaaataaaagtggcaaaccgagtctct gtcgacaattttgtagaagttagtacttctatggcaccacaaacagtgaaggattttggg ctgggagaagcagacataattctcttgtctaaaagctctaatccagcaacagacaaacag gcaccacattgtttggctcgagtgagtggcctagttaagaaaaggggacaaatggaaata acgttccgcgtaaaccccatgaacccattgataaacgctatatcccccggcgcgagccta tacagcatccgcatttcgtcgttgacgcctctcgagcgagaatatggtgctctgatggcg ctgagatactatgacctgagcgacgagatcatcagggcgaagccgtctccgatactcaac tatagcgcagaagcggtaaaaaatattttaaatacgtataacctgaatcttgcacaatca aaagcagtcaaatctgctattgataatgatgcctttacgctgattcagggtcctccagga tcgggaaaaacgaaaaccatcgttgcactcgtaggtgctttgcttagcaacacgctttct gagcatcgaattgctccgcctcgacctggtgataagacagctcgttctatggctaaaaaa ttactggtttgcgcgcctagcaacgccgccgtagacgaacttgtaatgcgatttaaggaa ggcgtaaagacgttgtacggcagatcccaaaacatttcagttatccgtcttggtcgaagc gatgctataaatgcaaatgtcttggatgtcactttagatgaactcgtgaacgcgaaactc agccaagctggtcagaagaacgggaacgaaagggatctccaaagcctttacacagagcac aaagagacgtcgaacaaattcaacgaaattcgagaacggttagaccagtgccgcgcaaag ggtcaagctgttccgaatgaacttgatcgggagtttgatttgttgaaacgaaagagagca cagctcagtcaagcaatcgattccgctagagataagaaccaggcggccgctcgtaatgca gaacttacacgcaggaaaatacagcaagagatcatcgatggcgcccatgttatttgcgct acgctgagtggcagtggccatgacatgtttcagactttgagcattgagtttgaaactgtt attatcgatgaagcagctcagtctatcgaactgagtgcgcttattccgctgaaatacggc tgctcgaaatgcatcctggtcggtgatccaaagcagctgccgccaactgttctgtcaaag gaagcttcaaggttccagtatgaacagagtttattcgtcagaatgcaagcgaaccatcca caggatgttcatttgctggacactcaatatcgtatgcatccggaaatcagtcgattccca agcactgcattttacgatggacggctccaggacggcccagatatggcgcgattgcggatg cgaccatggcataacacctccttactcggaccataccgcttctttgacgtccaaggaatg catgcaagtgcccctaaaggccattccctggttaatctagcggagcttagggtggcaatg cggctatacgagcgcttgatcgcggatttccctacttatgacttttccgggaaaattggc atcatcacaccgtacaagggccagctgagggaactcaagcaacaattcgccaacaagtat ggaaacgcaatattcaaagcagtcgaatttaacacaaccgatgctttccagggcagagaa tgcgaagtgattatattctcctgcgtcagagcttcaagccatggcatcggtttcttggct gatatccgtcgtatgaacgtgggtttgactcgtgcaaagtcctctctttgggttttgggc aattcgcaatcgcttgttcggggagaattctggcgagggctcgtcaaagacgctcgggag cggaatctatataccgacggcgacgtgtacaaactactacaaacaccgcaaaagctcttg gagccaaacgatattgaaatggtggacgcgccgccggacagcattcccggctcagatcta ccctcaaggccagcatctgccatgacaggaggcactggaggtagtagaccgtcgtcgagg ctttcgggtagccgattctcggttgggaatgaaacacctacaaacctatcgatggacgac actccgtcgcgcagcgctatgtccacaccggtgcagccactagacatacctggaggcggg ggcaatggtctgaatgagaagttggcctgtggatactgtggaagccttttgcacatttcg caaaattgcgataattttgaggccaagagtatcagtcaaggaacatgctttagatgtcgc aaagaaggccattcaaaaagagactgcaccgcaattcgatgtgtagagtgcggtatgttt gggcatagtgctgaagcgtgcaaatccacgcaggttctgagcaaatcagcgaaagacagg atcatgagagatgagcttcagttcaaactcctccaaaaacgcaatgtggagcgccggaag gaaagacagcttggagaccatgatcccaaggttcctaaaatccaggtggccccgacagta tcgactcccggaccacacggatcaccccagaacggaccgaatgtgactgatattgctggg aaacgaaaacgcgggagcttggacttgcctgatacaaagggagccaaagtgccgaggtca aaccgagatgggcctgttcccaatgcaccaagaggaccgaaaggaaagaggattgatcct cattcagttgctccgccagcaagcgatcttgtggtaccgtctaaagacagagctggccat cgaccaattgatgcaaaaacgcacgataaacttgcagggcctggccataatgtaaatagc tcgtcggttgcgcaacctgcggcaccaccaaaaagggtagacaggcccccatttcggaag aaaaagccagtagacccgttcattcgtcccaaacgaagatga

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