Uncinocarpus reesii: UREG_04960
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Entry
UREG_04960 CDS
T01132
Name
(RefSeq) similar to exosomal core protein CSL4
KO
K07573
exosome complex component CSL4
Organism
ure
Uncinocarpus reesii
Pathway
ure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_04960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_04960
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
UREG_04960
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
UREG_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
8438014
NCBI-ProteinID:
XP_002584271
UniProt:
C4JV07
LinkDB
All DBs
AA seq
262 aa
AA seq
DB search
MGAPQLPSIAVPGQRLADTSAYTSGPGTYIHEHSIRASIPGPVIVQESDTDQKGKKAKII
TVARSSAPSTAPTTSTPAQPSGLALIGSTNKRIPLKFNTLPTVGSIVLGRVTRVQKRQAT
ISILLVLPDQRATPTLDAEGASDADLPSILASASISTASDSLNADELRPQALIRKEDVRA
VEKDRVVVEESFRVGDIVRAVIVSVGDQVAYYASTAGNELGVVMARSSADEGGGNMMFPV
SWKEMRDPATGKGEMRKVAKPF
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgggagctccccagctcccttcaatcgccgtccccggccaacggctagcagatacttcc
gcgtacacctccgggcccggcacttatattcacgagcactcgatccgcgcctccatcccc
ggccccgtcatcgtccaagaatcagatacagaccaaaaaggcaaaaaggccaaaataata
actgtcgcgcgctcctctgcgccatccaccgctcccacaaccagcactcccgcccaaccc
tccggcctcgctctaatcggctccacgaacaaaaggatcccgttaaaattcaacaccctc
cccaccgttggcagcatcgtcctcggccgcgtgacccgtgttcaaaagcgccaggcgacc
atctcgattctgcttgttctgcctgaccagcgggccacgcccaccctcgatgcggagggt
gcctccgacgcggatcttccgtcgattctcgccagtgctagtatatcaacggcctcggac
tcgctgaatgctgatgaactgcgtccgcaggcgctgattcgaaaggaggacgtgagggcg
gtggagaaggatcgcgtggtggtggaggaatcgtttcgcgttggggatattgtgcgggcg
gtgattgtgagtgtgggtgaccaggtggcgtactatgcgagtacggcggggaacgagctg
ggtgtggtcatggcgaggagcagcgcggatgagggtggcgggaatatgatgtttccggtc
agttggaaggagatgagggatccggcgacggggaaaggggagatgaggaaggttgcgaag
ccgttttga
DBGET
integrated database retrieval system
