KEGG   Uncinocarpus reesii: UREG_05209
Entry
UREG_05209        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K03143  transcription initiation factor TFIIH subunit 3
Organism
ure  Uncinocarpus reesii
Pathway
ure03022  Basal transcription factors
ure03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    UREG_05209
  09124 Replication and repair
   03420 Nucleotide excision repair
    UREG_05209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ure03021]
    UREG_05209
   03400 DNA repair and recombination proteins [BR:ure03400]
    UREG_05209
Transcription machinery [BR:ure03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     UREG_05209
DNA repair and recombination proteins [BR:ure03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     UREG_05209
SSDB
Motif
Pfam: Tfb4
Other DBs
NCBI-GeneID: 8438182
NCBI-ProteinID: XP_002584520
UniProt: C4JRX0
LinkDB
AA seq 398 aa
MNAVDASDHYDTSSADTSPSLLTIVLDTNPHAWALLEETLPLSTAVANLLVFINAHLACN
YANKVAVVASHSQEARWLYPASTTSPSNSQNGSTDTDGDTNMSSSNPPPTQSNKYRPFRI
VEEQLTRNLKDLLSTTSPASLSSTTSTMMAGALTLALSHINRETIVYAETHGASSAKLDA
DPSNPAPTASALPPPPGSTFDPSSNTNRNLSGLQSRILIISVSSATGSAHQYIPIMNSIF
ACQRLHIPIDICKLSGDAVFLQQACDATRGIYVPVDHPLGFLQYLMVAFLPDQRSRSHLI
LPTRVDVDFRAACFCHRKVVDVGFVCSICLSIFCEPPEGADCLTCGTHLELGDYGAKPVV
VARKKKRKKGTGKGPNANGGSSGGATPIPHSTPTSTLP
NT seq 1197 nt   +upstreamnt  +downstreamnt
atgaatgccgtcgatgcgtccgatcactatgacaccagctcagcggatacctctccgtcg
cttctaaccattgtcctggacacaaacccgcacgcttgggccctgcttgaagagaccctc
ccgctctctaccgccgtcgcaaacctgctcgtctttataaacgcccatctcgcgtgcaat
tatgcaaataaagtggcggttgttgctagccactcccaggaagctcgatggctgtatccc
gcatcaactacaagcccatcaaacagccagaatggctcaacagacacagacggagacacc
aacatgtcctcgtcaaacccaccgcctacccaatccaataaataccggccctttcgaatc
gttgaagaacagctaacccgcaacctgaaagatctcctctcgaccacctctcccgcctcc
ctcagctccaccacctcaaccatgatggctggcgccctcaccctcgccctcagccacatc
aaccgcgaaacaatcgtctacgccgaaactcacggcgcctcctccgccaaacttgacgct
gacccatctaaccccgccccaaccgcctccgcgctcccaccacccccaggttcaaccttt
gatccgtcttccaacacaaaccgcaacctctcaggcctccaatcccgcatcctcatcatc
tccgtcagcagcgccaccggatccgcccaccaatatatcccaatcatgaacagcatcttc
gcgtgccagcgccttcacatcccaatcgatatctgcaagctctccggcgacgccgtcttc
ctccaacaagcctgcgacgcaacacgcggcatctatgttcccgtggaccacccgttaggc
ttcctgcaatatctcatggttgcgttcctgccagatcagcgatcaaggagtcatttgatc
ctaccgaccagagtcgatgtcgatttccgcgccgcctgtttctgccatcggaaggtcgtc
gatgtggggtttgtgtgcagcatctgcctaagtatcttctgtgaacccccagagggcgca
gactgtttgacctgtggcacgcacctggagttgggcgattatggcgcgaaaccggttgtc
gttgcaaggaaaaagaaacgtaaaaagggtactggaaaaggacctaacgcaaatgggggc
tcatccggaggagcaaccccaatccctcattcgacgccgacatctacgctgccctga

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