Uncinocarpus reesii: UREG_05209
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Entry
UREG_05209 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
ure
Uncinocarpus reesii
Pathway
ure03022
Basal transcription factors
ure03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UREG_05209
09124 Replication and repair
03420 Nucleotide excision repair
UREG_05209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_05209
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_05209
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UREG_05209
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UREG_05209
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
8438182
NCBI-ProteinID:
XP_002584520
UniProt:
C4JRX0
LinkDB
All DBs
AA seq
398 aa
AA seq
DB search
MNAVDASDHYDTSSADTSPSLLTIVLDTNPHAWALLEETLPLSTAVANLLVFINAHLACN
YANKVAVVASHSQEARWLYPASTTSPSNSQNGSTDTDGDTNMSSSNPPPTQSNKYRPFRI
VEEQLTRNLKDLLSTTSPASLSSTTSTMMAGALTLALSHINRETIVYAETHGASSAKLDA
DPSNPAPTASALPPPPGSTFDPSSNTNRNLSGLQSRILIISVSSATGSAHQYIPIMNSIF
ACQRLHIPIDICKLSGDAVFLQQACDATRGIYVPVDHPLGFLQYLMVAFLPDQRSRSHLI
LPTRVDVDFRAACFCHRKVVDVGFVCSICLSIFCEPPEGADCLTCGTHLELGDYGAKPVV
VARKKKRKKGTGKGPNANGGSSGGATPIPHSTPTSTLP
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgaatgccgtcgatgcgtccgatcactatgacaccagctcagcggatacctctccgtcg
cttctaaccattgtcctggacacaaacccgcacgcttgggccctgcttgaagagaccctc
ccgctctctaccgccgtcgcaaacctgctcgtctttataaacgcccatctcgcgtgcaat
tatgcaaataaagtggcggttgttgctagccactcccaggaagctcgatggctgtatccc
gcatcaactacaagcccatcaaacagccagaatggctcaacagacacagacggagacacc
aacatgtcctcgtcaaacccaccgcctacccaatccaataaataccggccctttcgaatc
gttgaagaacagctaacccgcaacctgaaagatctcctctcgaccacctctcccgcctcc
ctcagctccaccacctcaaccatgatggctggcgccctcaccctcgccctcagccacatc
aaccgcgaaacaatcgtctacgccgaaactcacggcgcctcctccgccaaacttgacgct
gacccatctaaccccgccccaaccgcctccgcgctcccaccacccccaggttcaaccttt
gatccgtcttccaacacaaaccgcaacctctcaggcctccaatcccgcatcctcatcatc
tccgtcagcagcgccaccggatccgcccaccaatatatcccaatcatgaacagcatcttc
gcgtgccagcgccttcacatcccaatcgatatctgcaagctctccggcgacgccgtcttc
ctccaacaagcctgcgacgcaacacgcggcatctatgttcccgtggaccacccgttaggc
ttcctgcaatatctcatggttgcgttcctgccagatcagcgatcaaggagtcatttgatc
ctaccgaccagagtcgatgtcgatttccgcgccgcctgtttctgccatcggaaggtcgtc
gatgtggggtttgtgtgcagcatctgcctaagtatcttctgtgaacccccagagggcgca
gactgtttgacctgtggcacgcacctggagttgggcgattatggcgcgaaaccggttgtc
gttgcaaggaaaaagaaacgtaaaaagggtactggaaaaggacctaacgcaaatgggggc
tcatccggaggagcaaccccaatccctcattcgacgccgacatctacgctgccctga
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