Uncinocarpus reesii: UREG_05319
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Entry
UREG_05319 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ure
Uncinocarpus reesii
Pathway
ure03022
Basal transcription factors
ure03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
UREG_05319
09124 Replication and repair
03420 Nucleotide excision repair
UREG_05319
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_05319
03400 DNA repair and recombination proteins [BR:
ure03400
]
UREG_05319
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
UREG_05319
DNA repair and recombination proteins [BR:
ure03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
UREG_05319
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
GvpO
Motif
Other DBs
NCBI-GeneID:
8440418
NCBI-ProteinID:
XP_002584630
UniProt:
C4JS80
LinkDB
All DBs
AA seq
632 aa
AA seq
DB search
MASAPASATASYKKKDGTLSMSQDGQSVSWAPKISGGPVGAFTLHVANLSHLQQTPITSP
KIMLKIFAYQPGKAASGEVEQYLFAFTSPTNARAEADTIRDILNAGIQTAKTAQAAASGG
QSAAMAIASAVTSTGSGKPIWYDDNKLKSDAELQQSLLKSDQNLRQVFMELLRNKPESVS
SAQFMSQFWSSRVHLLRAHAIEKSQARGPYNVLSSLKPRVENSVTKLNISKEQIQLIFTQ
HPLVKKVYDENVPRLTEQEFWSRFFQSRLFKKLRGERITESDATDSLLDKYLRADEHAGH
NSTTNVPHIIDLEANEEDVRRHGNRPNFDMRPSSLDKVPVIRTLNQLSEKIMANVAPIDR
DPSAPVGMDEETFNQLQLRDLRENEEQDRIMLNIKDQSRFFAATKEEESNEARIFASQDP
AVILKSLNVDLARTYPDRGAGVPLDQLVEPEEDDSDEDDTHPKKQVVGSKAGLARASAQI
FEAIRDRRAQADSASNSKTCGLPQAIFDRLSLTHATTTEFLHQFWQAFLSGNPDRVAEIT
SLVESLNRAMDRIKAVSDEAEAERQAEIERRKQQAREIMAATGRNIRPNLKGVEGGQKVV
NQLMGPTVNALGKAISEYRTAVAQQSKEAALV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgcgccggccagcgcaacggcgtcatacaagaagaaggatggaacgctgtcc
atgtctcaagacgggcagtccgtctcatgggcgccaaaaataagcggcgggccagtgggt
gcttttacccttcatgttgcgaatcttagccatctccaacaaacccccatcacaagcccg
aaaatcatgcttaaaatctttgcgtatcaacccggaaaagctgcctctggggaggtggaa
caatatctttttgcttttacatctcccaccaacgcgcgtgccgaggcggatacgattaga
gatatactaaatgctggcattcaaacagcaaaaaccgcccaggcagctgcgtccggtggg
cagtcggcggctatggccatagcgagcgcggtgacttctaccggcagcggaaaacctatt
tggtacgatgacaataaactcaagtcagatgccgagctacaacagtctttgctgaagtcg
gaccagaatctgcgacaggtcttcatggagttgctgcggaacaaaccagaatcagtatcg
agcgcgcagttcatgtctcagttctggtcttcgcgagtacatctgcttcgtgcacacgcg
attgaaaaatcccaagctcgcgggccgtacaatgtgctttcttcgttgaaaccacgagtg
gagaacagtgttaccaagctaaacattagcaaagagcaaatccagctgatttttacccag
cacccattggtcaagaaggtatatgatgaaaatgtacccagactgacggagcaagaattc
tggtcccgctttttccaaagccggctatttaaaaagttgagaggcgagcgaattacagaa
tcagatgccaccgattcactacttgataagtatctgagggccgacgaacatgctggccac
aattcaacgacaaatgtaccacatatcattgaccttgaagcaaacgaagaggatgtcaga
aggcatgggaaccgtccgaattttgatatgaggccatcatctttggataaagtgcccgtc
attcgaactttgaatcaattgagcgagaagatcatggccaacgtcgcgccaatcgatcgt
gatccgtcggcgccggttgggatggacgaagagacattcaaccagctacaacttcgagat
cttcgtgaaaatgaagaacaagataggatcatgctgaacatcaaagatcagagtaggttt
tttgctgcaacaaaggaagaggaaagtaatgaagcgcgtatcttcgcgagtcaagatccg
gcagtcattttaaagtctttaaatgttgacttggccaggacatatcccgatagaggagct
ggtgtaccgttggatcagctcgttgaacccgaagaagatgacagtgatgaggatgatacc
catccgaagaaacaagtagttggctccaaggccggtttggccagggcttcggctcagatc
ttcgaggctattcgagaccgaagagcacaggctgattctgcatcgaattcaaaaacatgc
ggtttgccacaagcaatcttcgaccgtctaagcctcacgcacgcgaccaccactgagttt
ttacatcagttctggcaagctttcttgtctggaaaccctgatcgtgttgcggagatcacg
tcgttggttgaatccctcaatcgagcgatggatcgaatcaaagccgtctccgacgaggcg
gaagctgaacgccaggctgaaattgagcgccgcaaacagcaggctcgagagattatggcc
gccacgggtagaaatattcgaccgaatttgaaaggggtagagggcgggcagaaggtggtg
aatcagttaatggggcccacggtgaatgcactgggaaaggccatttcagagtatagaacc
gctgttgcgcagcagagcaaagaggcggcacttgtataa
DBGET
integrated database retrieval system
