Uncinocarpus reesii: UREG_05838
Help
Entry
UREG_05838 CDS
T01132
Name
(RefSeq) similar to Lsm6 protein
KO
K12625
U6 snRNA-associated Sm-like protein LSm6
Organism
ure
Uncinocarpus reesii
Pathway
ure03018
RNA degradation
ure03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UREG_05838
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_05838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_05838
03041 Spliceosome [BR:
ure03041
]
UREG_05838
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UREG_05838
mRNA degradation factors
5'-3' decay
Lsm complex
UREG_05838
Spliceosome [BR:
ure03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UREG_05838
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
8443583
NCBI-ProteinID:
XP_002585149
UniProt:
C4JTP9
LinkDB
All DBs
AA seq
144 aa
AA seq
DB search
MDEKGTSEGQDPSAFLSGITGASVTVKLNSGVVYKDGYMNIALEKTQEYIDGKLRNSYGD
VFVRGNNATLYNDRGARYFALVYAPPSLLAYSSSILSWYKRSASSLLSCPSVPVPCSDMP
VADEAIDCDDDWDSDDEELRDDGC
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaaaggaacttccgaaggccaagatccctctgcctttttaagcgggatcact
ggggcttcagtaaccgtgaaattgaattcaggcgttgtctataaagacgggtatatgaat
attgccctggaaaagacgcaagaatatatcgatgggaagctaaggaactcctatggcgat
gtatttgttcggggaaataatgccactttatacaacgatcgcggcgcgagatactttgcg
ctcgtttacgctccaccctctcttttagcgtattcgtcctccatcctctcttggtacaaa
cgatcggcttcctccctgctcagttgcccctctgtccctgtaccgtgctcagacatgcca
gttgcggatgaagcgatagactgcgacgacgattgggactctgatgatgaggagctgcgc
gacgatggttgctga
DBGET
integrated database retrieval system