Uncinocarpus reesii: UREG_06557
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Entry
UREG_06557 CDS
T01132
Name
(RefSeq) polyadenylate-binding protein
KO
K13126
polyadenylate-binding protein
Organism
ure
Uncinocarpus reesii
Pathway
ure03015
mRNA surveillance pathway
ure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UREG_06557
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_06557
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_06557
03041 Spliceosome [BR:
ure03041
]
UREG_06557
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
UREG_06557
mRNA cycle factors
Stress granule specific factors
UREG_06557
Spliceosome [BR:
ure03041
]
Complex C
Other components
Complex C specific factors
UREG_06557
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_7
RRM_10
RRM_RdRP1_2
RBD_DEAH11
RRM_MARF1
RRM_occluded
RRM_3
YflT
PABC_AtC3H46
DUF3887
RRM_YTH1
Motif
Other DBs
NCBI-GeneID:
8438386
NCBI-ProteinID:
XP_002583590
UniProt:
C4JVG5
LinkDB
All DBs
AA seq
765 aa
AA seq
DB search
MSADTATNPPVDTVPGAAPESATNGTDANTTTDATAGDGQAPSSTTATAQPHSASLYVGE
LDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEDLNYTLI
KGRPCRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDEFGN
SKGYGFVHYETAEAAQNAIKHVNGMLLNDKKVFVGHHIAKKDRQSKFEEMKANFTNVYVK
NIDQDTTDEEFRELFEKFGEITSATLARDSESGKSRGFGFVNFTSHESAAAAVDNLNEKD
FKSQKLYVGRAQKKHEREEELRKQYEAARIEKASKYQGVNLYIKNLSDDIDDEKLRDLFS
GYGTITSAKVMRDNLAAESSSDSEKEAKSEGKENEPPEESKDEAAEKAETKDTKEAKTES
KKADKKLLGKSKGFGFVCFSSPDEASKAVTEMNQRMVNGKPLYVALAQRKDVRRSQLEAS
IQARNTIRQQQAAAAAGMPQPFMQPPVFYGPGQQNFLPNQRGGMPFQQPGMVIPQMPGGR
HGQFSGFPGQQGGRGMNPNQQIPPNAYGLGAQGLPISMQGGMPNGLNYPQMAQVQAPFGR
GRGQVPAVQGMPPNVQGMGPNAQFGRGMPMQQGMGRPGQAGRGQGPAQAAGQRDETSSPS
GLTLQMLNAAPPAQQKQMLGEAIYPKIHAHQPELAGKITGMLLEMDNAELLALVDDDTAL
KAKVDEALTVYDEYVKNKGSESGDAAPDVSKSKDAGQEATEETKS
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagacaccgctaccaaccctccagttgacacagttccaggtgctgcacctgag
tctgccacgaacggcactgatgccaacacgaccaccgatgccaccgccggtgacggccag
gctccttcctcgaccaccgcgaccgctcaaccccactccgcctctctctatgtcggcgag
ctagacccctctgttacggaggccatgcttttcgaacttttctcctcgattggtcaagtc
gcttccatccgtgtatgccgcgatgcggttaccagaaggtccctgggatatgcctacgtc
aattacaataacactgccgatggtgagcgcgcactggaggatctaaactacactttgatc
aagggccgtccttgccgtatcatgtggtctcagcgtgatcctgctctccgcaaaactggc
cagggcaatgtctttatcaagaatttggacaccgcgattgataacaaagctctccacgac
acattcgccgcctttggtaacattctaagctgcaaggtggcccaggatgaattcggcaat
tccaagggctatggtttcgtccactacgagactgctgaagctgcgcagaatgccatcaaa
cacgtcaacggcatgttgttgaacgacaagaaggtgtttgttggtcaccacatcgccaaa
aaagatcgtcaaagcaagttcgaggaaatgaaggcaaacttcactaatgtctatgtgaag
aatattgaccaggataccacggacgaagagttccgggagctctttgaaaagtttggcgaa
attacctccgctacccttgcccgtgactccgaatcgggcaagagccgaggctttggattt
gtcaacttcaccagtcacgaaagcgccgccgctgctgttgataacctgaatgaaaaggat
ttcaagagccaaaagctctatgtcgggcgtgctcaaaagaaacatgagcgcgaggaggaa
cttcgcaagcagtacgaggcagctcgcatcgagaaggcgtcaaaataccagggagtcaac
ctctatatcaagaacttgagcgacgacattgacgacgaaaaattacgggatctcttcagc
ggctacggtactatcacctctgccaaggtaatgcgtgataaccttgccgcggagtcttcc
tccgattccgaaaaggaggccaaatcggagggcaaggaaaacgaaccccccgaagaatcc
aaggatgaagccgctgagaaggctgaaactaaggataccaaggaagccaaaacggaatca
aagaaagctgataagaagcttcttggaaagagtaaaggctttggatttgtctgcttcagt
agccccgatgaagcctcgaaggctgtcacggagatgaatcagcgtatggtgaacggcaag
cctttatacgtcgctctagcccaacgcaaagatgttcgaagaagtcaacttgaggcaagc
atccaagctcgcaacacgattagacaacagcaggcagccgccgctgctggcatgccacaa
ccattcatgcagcctccagtgttctatggccctggccaacaaaacttccttccaaatcaa
cgcggcggtatgccattccagcagcccggcatggttattccacagatgcctggtggccgg
catggccaattcagcggattccctggccagcaaggtggccgtggaatgaaccccaaccag
caaattcctcccaatgcatatggccttggtgctcagggtctgccaattagtatgcaaggc
ggaatgcccaacggccttaactatccccagatggcccaagtgcaagctccatttggtaga
ggacgtggccaggttcctgccgtgcagggaatgccaccaaacgttcaaggaatgggaccc
aatgctcaatttggacgcggaatgccaatgcaacaaggtatgggacgtccaggacaagcc
ggccgtggacaaggaccagcccaagccgcaggtcaacgcgacgaaacctctagtccaagt
ggcctcaccctccagatgttgaatgccgcaccacccgcacaacagaaacagatgcttggt
gaagcgatttacccaaagattcatgcccatcagcctgaactcgctggtaagatcacgggt
atgctcctagagatggataacgccgaattacttgccttggtcgatgatgataccgccctc
aaggccaaggttgacgaagccctcacagtatatgatgaatatgtaaagaacaagggtagt
gaaagtggcgacgctgcacctgatgtcagcaaatcgaaggatgctggtcaagaagctacg
gaggaaacgaagtcttag
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integrated database retrieval system