KEGG   Uncinocarpus reesii: UREG_06760
Entry
UREG_06760        CDS       T01132                                 
Name
(RefSeq) similar to Cpsf4 protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ure  Uncinocarpus reesii
Pathway
ure03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    UREG_06760
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ure03021]
    UREG_06760
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_06760
Transcription machinery [BR:ure03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     UREG_06760
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     UREG_06760
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 Torus zf-CCCH_2 zf-CCCH_4
Other DBs
NCBI-GeneID: 8442948
NCBI-ProteinID: XP_002583793
UniProt: C4JW18
LinkDB
AA seq 251 aa
MAEVHSVVNRIVSADNPRDPNFTRFAFSPFLRKTFGFGLASDVPVCKAYREGHCPLGPMC
PDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIKCEYLHEYNLRRMPECQSF
SRSGYCPNGDDCLYQHVPEEAKLPSCEHYEKGFCPLGPLCAKKHVRRKICPFYLAGFCPD
GRACAHGAHPRWPENLPKPTVRVEKSAEEIEREKARIREEQEKEEEREREWRRENRGRGG
RFMGGRFRGKR
NT seq 756 nt   +upstreamnt  +downstreamnt
atggcagaagtccatagtgtcgtgaaccggattgtgtccgccgacaatccgcgcgatcca
aatttcaccagattcgccttcagcccgttcctacgcaagacattcggctttggtctcgcc
tccgatgtccccgtctgcaaggcctatcgcgaagggcactgtcccctgggtcccatgtgt
cccgaccggcacccaacaccctcgcgaatctcaacagcgacgtcgcccgctatcgcgcca
tcgtctacgcacggcagtctggtctgcaaacattacctaaagggactatgcaaaaagggc
ataaaatgcgaatatctacacgaatacaatctgcgccgcatgccggagtgtcaatccttc
tcgcggagcggctactgtccaaacggcgatgattgcctgtaccaacatgtccccgaagaa
gcaaagctaccatcctgcgagcattatgagaagggcttctgtccgttgggaccgctgtgt
gcgaagaagcatgtgcggaggaagatttgtccgttttatctggctgggttttgccccgat
gggagagcgtgtgcgcacggtgcgcacccgcggtggccggagaatttgccgaagcctact
gtgagggtggagaagtctgcggaggagattgagagggagaaggctcgaattcgggaggag
caggagaaagaggaggagagggagcgggaatggaggagggaaaatcggggtcggggtggt
cggtttatgggcggaaggtttcgggggaagaggtga

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