Uncinocarpus reesii: UREG_06760
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Entry
UREG_06760 CDS
T01132
Name
(RefSeq) similar to Cpsf4 protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ure
Uncinocarpus reesii
Pathway
ure03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
UREG_06760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ure03021
]
UREG_06760
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_06760
Transcription machinery [BR:
ure03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
UREG_06760
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
UREG_06760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_2
zf-CCCH_4
Motif
Other DBs
NCBI-GeneID:
8442948
NCBI-ProteinID:
XP_002583793
UniProt:
C4JW18
LinkDB
All DBs
AA seq
251 aa
AA seq
DB search
MAEVHSVVNRIVSADNPRDPNFTRFAFSPFLRKTFGFGLASDVPVCKAYREGHCPLGPMC
PDRHPTPSRISTATSPAIAPSSTHGSLVCKHYLKGLCKKGIKCEYLHEYNLRRMPECQSF
SRSGYCPNGDDCLYQHVPEEAKLPSCEHYEKGFCPLGPLCAKKHVRRKICPFYLAGFCPD
GRACAHGAHPRWPENLPKPTVRVEKSAEEIEREKARIREEQEKEEEREREWRRENRGRGG
RFMGGRFRGKR
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagtccatagtgtcgtgaaccggattgtgtccgccgacaatccgcgcgatcca
aatttcaccagattcgccttcagcccgttcctacgcaagacattcggctttggtctcgcc
tccgatgtccccgtctgcaaggcctatcgcgaagggcactgtcccctgggtcccatgtgt
cccgaccggcacccaacaccctcgcgaatctcaacagcgacgtcgcccgctatcgcgcca
tcgtctacgcacggcagtctggtctgcaaacattacctaaagggactatgcaaaaagggc
ataaaatgcgaatatctacacgaatacaatctgcgccgcatgccggagtgtcaatccttc
tcgcggagcggctactgtccaaacggcgatgattgcctgtaccaacatgtccccgaagaa
gcaaagctaccatcctgcgagcattatgagaagggcttctgtccgttgggaccgctgtgt
gcgaagaagcatgtgcggaggaagatttgtccgttttatctggctgggttttgccccgat
gggagagcgtgtgcgcacggtgcgcacccgcggtggccggagaatttgccgaagcctact
gtgagggtggagaagtctgcggaggagattgagagggagaaggctcgaattcgggaggag
caggagaaagaggaggagagggagcgggaatggaggagggaaaatcggggtcggggtggt
cggtttatgggcggaaggtttcgggggaagaggtga
DBGET
integrated database retrieval system