Uncinocarpus reesii: UREG_06879
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Entry
UREG_06879 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
ure
Uncinocarpus reesii
Pathway
ure03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_06879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_06879
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
UREG_06879
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
DUF6987
Motif
Other DBs
NCBI-GeneID:
8442418
NCBI-ProteinID:
XP_002583912
UniProt:
C4JWD7
LinkDB
All DBs
AA seq
635 aa
AA seq
DB search
MDISAEFTPFQERLTTALVQATKTTSQLLAEDIAFQRSINPSLSSSLDEQSSRFLTLTNS
ILRFATSSSDLNVATLEDEETVDENWRAVVDVIDELLEKADACLDEFTGVIKKLTPSQDE
RGQDFSKRASRSQFPSVYDFSSAKLPKPQLSFNNRPNNHDSSPFRPILRQKPHAIVSLPL
SPDPAAGIGTEPSEHPYAHEIRNCRYPPSVYYKSEPQMYQPFESTSATFVNTMEGVQAML
KELKCAKEIGIDLEHHDTHSYYGLVCLMQISTRDKDWIVDTLLPWREELQILNEVFANPQ
IVKVLHGSSMDVIWLQRDLGLYLVGLFDTYHAAAALHYPKKSLKFLLDKFVNFQAEKKYQ
IADWRVRPLLPGMFDYARSDTHYLLYIYDHLRNELIERSTPGENLIDYVQENSKEEALQR
YERPVYDTETGQGAGGCEIDRECGPDHLSLSSESTTLAHSELINASEYAPLATFDALALS
LPLPSVPINVSDEPIKVEAGNGIMAAASGEGAASDSRNPPLTDQIFTVKQFGAPPKRKPA
AESDATPVPSPQPNPPRLEVSSSMSSKKRKSASNEDTVPFDYASADSVLRGRPADEVQST
SRKPQFNPYTKALDAPQALRKAKKDMGGGKSFTFQ
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggacatttcagcggagtttactccttttcaggagagattaacaaccgctcttgtgcaa
gctacgaaaaccacctcccagcttctggcggaagatatcgcctttcagcgctcgattaac
ccgagcctctcgagttcccttgacgagcagagtagccgatttcttacccttactaattcg
atccttcgctttgccacctcgagttccgacctcaatgttgcgactctggaagacgaggaa
accgtggacgaaaattggagagcggtggtcgatgtcattgacgagctcttggaaaaggct
gatgcctgccttgatgaattcactggggttatcaaaaaactgaccccgtcgcaagatgag
cgtggccaagattttagcaaacgagcctccagaagccagtttccaagtgtctacgatttt
tcctcggccaaattaccgaagccacagctctcgttcaacaatcgtcctaataatcatgac
tcttctccgtttcgaccgatcttgcgacaaaaaccccatgccattgtctcgttacctcta
tctcccgacccggccgccggcattggcacagagccatctgaacacccctatgcgcacgag
atccgaaactgccgatatcccccatctgtctattacaagtccgaacctcagatgtatcag
ccttttgaatcgacatccgcgacgtttgtaaataccatggaaggcgtccaggcgatgctt
aaggaactgaaatgcgcaaaagaaattggcatcgatctggagcatcacgatacgcattcg
tattatggccttgtttgtctcatgcagattagcactcgtgacaaagactggatcgttgac
acgctcctcccgtggagagaagagttacaaatactcaacgaagtattcgcaaatccgcag
atagtgaaagtcttgcatggctcctcgatggacgtaatatggctacaacgggacttaggg
ctgtatctggttggtcttttcgacacgtaccacgctgctgctgctctgcattacccgaag
aaaagcttgaagtttctgttagataagtttgtgaactttcaggcggagaaaaagtatcag
atcgcagattggcgagttcggcctttactacccggcatgtttgactacgcgcgatccgac
acgcactatttgctttatatttatgatcatctgcgcaatgagcttattgaaaggtcaact
cccggtgagaatttaatcgactatgttcaggagaattccaaggaggaggcacttcagcga
tacgagcggcctgtttacgacacggaaaccggacaaggtgcgggaggatgtgaaatcgac
agggagtgcggcccagatcacttgtctctcagttctgagagcacgacactcgcacactcc
gagttaattaatgcatccgaatatgctcctcttgcgaccttcgacgcccttgcactttcg
ctaccgcttccttcggtccccataaacgtttcagacgagcctatcaaggtagaagccggg
aatggtattatggcagcagcttctggcgaaggagcagcaagcgatagccggaatccacct
ttgacggaccagatcttcaccgtcaagcagttcggcgctccaccaaaacgcaaacccgct
gccgagagcgacgccacacccgtaccttcaccacaaccgaatccccctcgtctcgaggtc
tctagctccatgtcgtcgaagaagcgaaagtccgcctcgaatgaggataccgtccccttt
gattatgcaagtgcggattctgtccttcggggccggccggcggacgaggtgcagagtacg
tctcgcaaaccgcagtttaatccatacacaaaggccttggatgcgccgcaggcattgagg
aaagctaaaaaggacatgggaggcggcaagtcttttacgtttcaatag
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