Uncinocarpus reesii: UREG_07058
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Entry
UREG_07058 CDS
T01132
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ure
Uncinocarpus reesii
Pathway
ure03018
RNA degradation
ure03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ure00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UREG_07058
09123 Folding, sorting and degradation
03018 RNA degradation
UREG_07058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ure03019
]
UREG_07058
03041 Spliceosome [BR:
ure03041
]
UREG_07058
Messenger RNA biogenesis [BR:
ure03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
UREG_07058
mRNA degradation factors
5'-3' decay
Lsm complex
UREG_07058
Spliceosome [BR:
ure03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
UREG_07058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
DUF6897
Motif
Other DBs
NCBI-GeneID:
8440634
NCBI-ProteinID:
XP_002582285
UniProt:
C4JY07
LinkDB
All DBs
AA seq
139 aa
AA seq
DB search
MSERSSFRGGFSRGGGRGGGRGGRGGQRGGGAGSGGAGSQQQQQEKPKKENILDLTKYMD
KEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKEIMRDDEGNDSTRSLGLIVARGTLLVLI
SPVDGSEEIANPFLQQEEE
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacgaagctcctttcgcgggggcttctctcgcggtggaggccgcggcggaggg
cgcggagggcgcggcgggcagagaggtggcggtgcgggtagtggcggtgcaggatcccag
caacagcaacaggagaagccgaagaaggagaatatcctcgatcttaccaagtacatggac
aaggaggtccatgtgaagttcagtggcgggcgagaagtcaccggcacgctaaagggctac
gatcagcttatgaatctcgtcctcgacgacgtaaaagagatcatgcgtgatgacgagggc
aatgattcaacccggtcgttaggcctgattgtggcccgaggaactctactggttttgatt
tcaccggttgatggaagtgaagagatagcgaatccttttctacagcaagaagaggaatga
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