KEGG   Uncinocarpus reesii: UREG_07058
Entry
UREG_07058        CDS       T01132                                 
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
ure  Uncinocarpus reesii
Pathway
ure03018  RNA degradation
ure03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ure00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    UREG_07058
  09123 Folding, sorting and degradation
   03018 RNA degradation
    UREG_07058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ure03019]
    UREG_07058
   03041 Spliceosome [BR:ure03041]
    UREG_07058
Messenger RNA biogenesis [BR:ure03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     UREG_07058
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     UREG_07058
Spliceosome [BR:ure03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    UREG_07058
SSDB
Motif
Pfam: LSM FoP_duplication DUF150_C DUF6897
Other DBs
NCBI-GeneID: 8440634
NCBI-ProteinID: XP_002582285
UniProt: C4JY07
LinkDB
AA seq 139 aa
MSERSSFRGGFSRGGGRGGGRGGRGGQRGGGAGSGGAGSQQQQQEKPKKENILDLTKYMD
KEVHVKFSGGREVTGTLKGYDQLMNLVLDDVKEIMRDDEGNDSTRSLGLIVARGTLLVLI
SPVDGSEEIANPFLQQEEE
NT seq 420 nt   +upstreamnt  +downstreamnt
atgtctgaacgaagctcctttcgcgggggcttctctcgcggtggaggccgcggcggaggg
cgcggagggcgcggcgggcagagaggtggcggtgcgggtagtggcggtgcaggatcccag
caacagcaacaggagaagccgaagaaggagaatatcctcgatcttaccaagtacatggac
aaggaggtccatgtgaagttcagtggcgggcgagaagtcaccggcacgctaaagggctac
gatcagcttatgaatctcgtcctcgacgacgtaaaagagatcatgcgtgatgacgagggc
aatgattcaacccggtcgttaggcctgattgtggcccgaggaactctactggttttgatt
tcaccggttgatggaagtgaagagatagcgaatccttttctacagcaagaagaggaatga

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