KEGG   Usitatibacter rugosus: DSM104443_00060
Entry
DSM104443_00060   CDS       T06990                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
uru  Usitatibacter rugosus
Pathway
uru00521  Streptomycin biosynthesis
uru00523  Polyketide sugar unit biosynthesis
uru00525  Acarbose and validamycin biosynthesis
uru00541  Biosynthesis of various nucleotide sugars
uru01100  Metabolic pathways
uru01110  Biosynthesis of secondary metabolites
uru01250  Biosynthesis of nucleotide sugars
Module
uru_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:uru00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    DSM104443_00060 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    DSM104443_00060 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    DSM104443_00060 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    DSM104443_00060 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    DSM104443_00060 (rfbB)
Enzymes [BR:uru01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     DSM104443_00060 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase RmlD_sub_bind Polysacc_synt_2 NAD_binding_4 3Beta_HSD adh_short KR
Other DBs
NCBI-ProteinID: QJR09025
UniProt: A0A6M4GPM9
LinkDB
Position
70347..71414
AA seq 355 aa
MTILVTGGAGFIGSNFVAGWLAGTDEPVVNLDKLTYAGNLANLESLRADERHRFVRGDIG
DRAAMDALLKAHAPRAVVHFAAESHVDRSIHGPADFIQTNVVGTFTLLEAVRSYWGSLEP
AAKAAFRFLHVSTDEVYGSLGEDDPAFSETTAYAPNSPYSASKAGSDHLVRAYHHTYGLP
VVTTNCSNNYGPFQFPEKLIPLMIANALEGKPLPVYGDGRQVRDWLYVADHCEAIRLVLE
RGALGEVYNVGGNAERRNLEVVHTLCDILDAERPRSGGHRALIQFVTDRPGHDRRYAIDS
RKIQGALGWRPRESFESGLAKTVRWYLGHADWVAQVRSGEYRRWIEKNYAERPAS
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgacaatcctcgtgacgggcggcgcgggcttcatcggctcgaacttcgtggccggctgg
ctcgccggcacggacgagccggtcgtgaacctcgacaagctcacctatgcgggcaacctc
gcgaacctcgaatcccttcgagccgacgagcgccaccgcttcgtccgcggcgacatcggc
gaccgagcggcgatggacgcgctgctgaaggcgcacgctccgcgcgccgtcgtgcacttc
gcggccgagagccacgtcgaccgctccattcacggtccggcggatttcatccagaccaac
gtcgtcggcaccttcacgctgctggaagccgtgcgttcgtactggggctcgctcgagccg
gcggcgaaggcggcgttccgcttcctgcacgtctccacggacgaggtgtacggctcgctc
ggcgaggacgaccccgcgttctccgagacgaccgcatacgccccgaacagcccgtactcc
gcatcgaaggccggttccgatcacctggtgcgcgcctatcaccacacgtacggccttccg
gtcgtgacgaccaactgctcgaacaactacggcccgttccagttccccgagaagctgatc
ccgctgatgatcgccaacgcgctcgaaggcaagcccctgccggtgtacggcgacggccgc
caggtgcgcgactggctctacgtcgccgaccactgcgaggccatccggctcgtgctcgag
cgcggcgccctgggcgaggtctacaacgtcggcggcaacgccgagcgcaggaacctcgag
gtggtgcacacgctgtgcgacatcctcgatgcggagcgaccgagatccggcggccatcgc
gcgctcattcaattcgtcaccgaccgtcccggccacgaccggcgctacgccatcgacagc
cgcaagatccagggcgcgctcggatggcgcccgcgtgagtcgttcgagtccgggctcgcg
aagacggtgcgctggtacctggggcacgccgactgggtggcgcaggtgaggagcggcgag
taccgccgctggatcgagaagaactacgcggaaaggccggcctcatga

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