Usitatibacter rugosus: DSM104443_00060
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Entry
DSM104443_00060 CDS
T06990
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00521
Streptomycin biosynthesis
uru00523
Polyketide sugar unit biosynthesis
uru00525
Acarbose and validamycin biosynthesis
uru00541
Biosynthesis of various nucleotide sugars
uru01100
Metabolic pathways
uru01110
Biosynthesis of secondary metabolites
uru01250
Biosynthesis of nucleotide sugars
Module
uru_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSM104443_00060 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DSM104443_00060 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
DSM104443_00060 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DSM104443_00060 (rfbB)
00525 Acarbose and validamycin biosynthesis
DSM104443_00060 (rfbB)
Enzymes [BR:
uru01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
DSM104443_00060 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
QJR09025
UniProt:
A0A6M4GPM9
LinkDB
All DBs
Position
70347..71414
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AA seq
355 aa
AA seq
DB search
MTILVTGGAGFIGSNFVAGWLAGTDEPVVNLDKLTYAGNLANLESLRADERHRFVRGDIG
DRAAMDALLKAHAPRAVVHFAAESHVDRSIHGPADFIQTNVVGTFTLLEAVRSYWGSLEP
AAKAAFRFLHVSTDEVYGSLGEDDPAFSETTAYAPNSPYSASKAGSDHLVRAYHHTYGLP
VVTTNCSNNYGPFQFPEKLIPLMIANALEGKPLPVYGDGRQVRDWLYVADHCEAIRLVLE
RGALGEVYNVGGNAERRNLEVVHTLCDILDAERPRSGGHRALIQFVTDRPGHDRRYAIDS
RKIQGALGWRPRESFESGLAKTVRWYLGHADWVAQVRSGEYRRWIEKNYAERPAS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcctcgtgacgggcggcgcgggcttcatcggctcgaacttcgtggccggctgg
ctcgccggcacggacgagccggtcgtgaacctcgacaagctcacctatgcgggcaacctc
gcgaacctcgaatcccttcgagccgacgagcgccaccgcttcgtccgcggcgacatcggc
gaccgagcggcgatggacgcgctgctgaaggcgcacgctccgcgcgccgtcgtgcacttc
gcggccgagagccacgtcgaccgctccattcacggtccggcggatttcatccagaccaac
gtcgtcggcaccttcacgctgctggaagccgtgcgttcgtactggggctcgctcgagccg
gcggcgaaggcggcgttccgcttcctgcacgtctccacggacgaggtgtacggctcgctc
ggcgaggacgaccccgcgttctccgagacgaccgcatacgccccgaacagcccgtactcc
gcatcgaaggccggttccgatcacctggtgcgcgcctatcaccacacgtacggccttccg
gtcgtgacgaccaactgctcgaacaactacggcccgttccagttccccgagaagctgatc
ccgctgatgatcgccaacgcgctcgaaggcaagcccctgccggtgtacggcgacggccgc
caggtgcgcgactggctctacgtcgccgaccactgcgaggccatccggctcgtgctcgag
cgcggcgccctgggcgaggtctacaacgtcggcggcaacgccgagcgcaggaacctcgag
gtggtgcacacgctgtgcgacatcctcgatgcggagcgaccgagatccggcggccatcgc
gcgctcattcaattcgtcaccgaccgtcccggccacgaccggcgctacgccatcgacagc
cgcaagatccagggcgcgctcggatggcgcccgcgtgagtcgttcgagtccgggctcgcg
aagacggtgcgctggtacctggggcacgccgactgggtggcgcaggtgaggagcggcgag
taccgccgctggatcgagaagaactacgcggaaaggccggcctcatga
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