Usitatibacter rugosus: DSM104443_00156
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Entry
DSM104443_00156 CDS
T06990
Symbol
polA_1
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
uru
Usitatibacter rugosus
Pathway
uru03030
DNA replication
uru03410
Base excision repair
uru03420
Nucleotide excision repair
uru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM104443_00156 (polA_1)
03410 Base excision repair
DSM104443_00156 (polA_1)
03420 Nucleotide excision repair
DSM104443_00156 (polA_1)
03440 Homologous recombination
DSM104443_00156 (polA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uru03032
]
DSM104443_00156 (polA_1)
03400 DNA repair and recombination proteins [BR:
uru03400
]
DSM104443_00156 (polA_1)
Enzymes [BR:
uru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM104443_00156 (polA_1)
DNA replication proteins [BR:
uru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DSM104443_00156 (polA_1)
DNA repair and recombination proteins [BR:
uru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DSM104443_00156 (polA_1)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM104443_00156 (polA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QJR09120
UniProt:
A0A6M4GP76
LinkDB
All DBs
Position
168081..170906
Genome browser
AA seq
941 aa
AA seq
DB search
MTEAQKTILLVDFSGYLYRAFFAIKSMTSPAGEPTNAIYGVVNMLRKAKQDFPSDYIACV
LDPKGKTFRDEIYADYKATRSAMPEDLASQIEPLIETIGALGWPIVVVDGVEADDVIGTI
AAMARREGWKTIISTGDKDLTQLVDERTLWVNTMSGDRLGPEGVKEKFGVPPERIIDYLA
LVGDTVDNVPGVDKVGPKTAAKLIQEYGSLDGLMANAAQVKGAVGENLRKALDWLPTAKT
LVTVKCDVELPFAVETLVERDIDREKLLGLFERFGFRTLRDAILKTEDAPEKGDAPAPAA
DSDEAKRAAGARVQEKKGRNFAILNAGIDTVADAVPFVDTRNYETILDGEALERWARKLE
AATLASVDTETTSLDPMLAEIVGISFSAAPGEGAYIPLTHRYAGAPDQLPIEGVLARLKP
WLEDASKAKVGQNTKYDRQVFASYGIATRGFLHDTLLESYVFQSHQRHDMDALATRFLGA
SGLMQYTDVAGKGASSIPFDQVDIARAAAYSAEDADVTLQIHGALWPRVEADAKLKRIYA
DIEIPVSSVLLTMERNGVLIDGQLLAKQGQELGQKMLDLERKAHELAGGPFNLGSPKQLA
EILFVRMGLKAVKKTPSGAPSTDEEVLEKLAEDHPLARTLLDHRSVSKLKSTYTDKLPRM
VHPKTGRVHTNYAQAVAVTGRLSSNDPNLQNIPVRTTEGRRIREAFVAPAASKIVSADYS
QIELRIMAHLSGDKSLIDAFSRGEDIHRHTAAEVFGATTDEVTSEQRRYAKVINFGLIYG
MSAFGLAGNLGIERSAAASYMDKYFARYPGVAQYMDRTRQEAKEHGYVETVFGRRLWLPD
INSGNAPRRQGAERQAINAPMQGTAADLIKLAMIAVQGWLEREKLATKLVMQVHDELVLE
VPENELDRVKPEVEKLMMGVATLDVPLVVEAGVGDNWEKAH
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagcccaaaagaccatcctgctggtcgacttctccggctacctgtatcgcgcg
ttcttcgcgatcaagtcgatgaccagcccggcgggcgagcccaccaacgccatctacggc
gtggtgaacatgcttcgcaaggcgaagcaggactttccgtccgattatatcgcctgcgtt
ctcgatcccaagggcaagaccttccgcgacgagatctacgccgactacaaggccacgcgc
tcggccatgcccgaggacctcgcctcgcagatcgagccgctgatcgaaaccatcggtgcg
ttgggctggcccatcgtcgtcgtcgacggcgtcgaggccgacgacgtgatcggcaccatc
gccgcgatggcgcgccgcgaaggctggaagacgatcatctccaccggcgacaaggacctc
acgcagctcgtggacgagcgcacgctgtgggtcaacacgatgtccggcgaccgcctcggc
ccggaaggcgtgaaggaaaaattcggcgtgccacccgagcggatcatcgattacctggcg
ctcgtcggcgacacggtggacaacgtgcccggcgtcgacaaggtcggcccgaagaccgcg
gcgaagctgatccaggaatacggctcgctcgatgggctgatggccaacgcggcgcaggtg
aagggtgccgtcggcgagaaccttcgcaaggcgctggattggctgcccaccgcgaagacg
ctcgtcaccgtgaaatgcgacgtggagcttccgttcgcggtcgagacgctggtcgagcgc
gacatcgatcgcgagaagctcctcggcctcttcgagcgcttcggcttccgcacgcttcgc
gacgcgatcctcaagaccgaagatgcgccggagaaaggtgacgcccccgcaccggccgcc
gattccgacgaggccaagcgcgccgccggcgcacgcgtacaggagaagaagggccgcaac
ttcgcgatcctcaatgcgggcatcgacacggtggccgacgccgtgccgttcgtcgatacg
cgcaactacgagacgatcctcgacggcgaggcgctcgagcgctgggcgcgcaagctggaa
gcggcgacgctcgcgagcgtcgataccgaaacgacgagcctcgaccccatgctggccgag
atcgtgggcatctcgttttccgcggcgcccggcgagggcgcgtacatcccgctcacgcac
cgttatgccggcgccccggaccagctcccgatcgagggcgtgctcgcgcgcctgaagcca
tggctcgaggatgcctcgaaggccaaggtgggccagaacaccaagtacgaccgccaggtg
ttcgcgagctacggcatcgccacgcgcgggttcctgcacgacacgctgctcgagtcgtac
gtcttccagagccaccagcgccacgacatggatgcgctcgccacgcgcttcctgggcgcc
tccggcctgatgcagtacaccgacgtcgcgggcaagggtgcctcgtcgatccccttcgac
caggtggacatcgcgcgcgccgcggcctactccgccgaagacgccgacgtgacgctgcag
atccacggcgcgctctggccgcgcgtggaggccgacgcgaagctgaagcgcatctacgcg
gacatcgagatccccgtgtcgagcgtgctgctcacgatggagcggaacggcgtgctcatc
gacgggcagctcctggcgaagcagggccaggagctcggccagaagatgctggacctcgag
cggaaggcgcacgagctcgcgggcgggcccttcaacctcggctcgccgaagcagctggcc
gagatcctcttcgtgcgcatgggactgaaggcggtcaagaagacgccgtccggtgcgccg
tccaccgatgaggaagtcctcgagaagctcgccgaagaccatccgctcgcccgcacgctg
ctcgaccatcgctcggtgtcgaagctgaagagcacctacaccgacaagctgccgcgcatg
gtccacccgaagacggggcgcgtgcacaccaactacgcgcaggccgtcgcggtgaccggg
cgcctgtcgtcgaacgatccgaacctgcagaacatcccggtgcgcactaccgagggccgg
cgtattcgcgaagcgttcgtggcgcccgcggcctcgaagatcgtctccgccgactactcg
cagatcgagctgcggatcatggcgcacctctcgggcgacaagagcctgatcgacgccttc
tcgcgcggcgaggatatccaccgccacaccgccgcggaagtgttcggtgccacgacggat
gaagtgacctccgagcagcgccgctacgcgaaggtgatcaacttcggcctcatctacggc
atgagcgccttcggcctcgcgggcaacctcggcatcgagcgctcggccgccgcgagctac
atggacaagtacttcgcgcgctatccaggcgtggcccagtacatggaccgcacgcggcag
gaggcgaaggagcacggctacgtggagaccgtgttcggccgccgcttgtggctcccggac
atcaactcgggcaacgcgccgcgacggcagggcgccgagcgccaggcgatcaacgcgccc
atgcagggcacggccgcggacctcatcaagctcgcgatgatcgcggtgcagggctggctc
gagcgcgagaagctcgccaccaagctcgtgatgcaggtgcacgacgagctggtgctggag
gttccggagaacgagctcgatcgcgtgaagccggaagtcgagaagctgatgatgggtgtc
gccacactcgacgtgccgctggtggtggaggcgggggtcggcgacaactgggagaaggcg
cattga
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integrated database retrieval system
