Usitatibacter rugosus: DSM104443_00385
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Entry
DSM104443_00385 CDS
T06990
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
uru
Usitatibacter rugosus
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
uru03016
]
DSM104443_00385 (miaB)
Enzymes [BR:
uru01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
DSM104443_00385 (miaB)
Transfer RNA biogenesis [BR:
uru03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
DSM104443_00385 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QJR09345
UniProt:
A0A6M4GQM5
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All DBs
Position
384264..385619
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AA seq
451 aa
AA seq
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MTGPKKVFIRTFGCQMNEYDSDKMADVLHASEGFEKTDRVEDADLILFNTCSVREKAQEK
VFADLGRVRALKKDKPGLLIGVGGCVASQEGGEIVKRAPFVDLVFGPQTLHRLPAMIAER
RSSGEAQVDISFPEIEKFDHLPPARVEGGSAFVSIMEGCSKYCTFCVVPYTRGEEVSRPF
DDVLAEVRDLASKGVMEVTLLGQNVNAFVGEMEDGEPADFALLLAHVSRIPGIERIRYTT
SHPLEFTPRLIEAYAKLPKVVSQLHLPVQSGSDRILAAMKRNYTAMEYKSIIRRLRAARP
DISLSTDFIVGFPGETEADFEQTMALVEDVRFDGAFSFIYSPRPGTPASNLSDETPAGVK
LARLARLQKRLQEFSEQYSAAMVGSRQRVLVEGHARKNPAELAGRTENNRVVNFAGNRRL
IGNYVDLQIVHAYPHSLRGEVVTALEAAAQS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgaccggacccaagaaggtcttcatccgcacgttcggatgccagatgaacgagtacgac
tcggacaagatggccgacgtgctccacgccagcgaaggcttcgagaagaccgaccgcgtc
gaggacgcggacctgatcctcttcaacacgtgctccgtgcgcgagaaggcgcaggaaaag
gtcttcgcggatctcggccgcgttcgcgccctcaagaaggacaagcccggcctgctgatc
ggcgtgggcggctgcgtggcgagccaggagggcggcgagatcgtgaagcgcgcgcccttc
gtggacctggtgttcggcccgcagacgctccaccgcctgcccgcgatgatcgccgagcgc
cgctcgagcggcgaggcgcaggtcgacatctcgtttcccgagatcgagaagttcgaccac
ctgccgccggcgcgcgtcgagggcggctcggccttcgtctcgatcatggagggctgcagc
aagtactgcacgttctgcgtcgtgccctacacgcgcggcgaggaagtctcgcgcccgttc
gacgacgtgctcgcggaagtgcgcgatctcgcctccaagggcgtgatggaagtgaccctc
ctcggccagaacgtgaacgccttcgtgggcgagatggaggacggcgagcccgcggacttc
gcgctgctgctcgcgcatgtctctcgcatccccggcatcgagcgcatccgctacaccacc
tcgcatccgctcgagttcacgccgcgcctgatcgaggcctacgcgaagctgccgaaggtg
gtctcgcagctccacctcccggtgcagtccggctcggaccgcatcctcgcggcgatgaag
cgcaactacaccgcgatggaatacaagtcgatcatccggcgcctgcgcgcggcgcggccg
gacatctcgctgtccaccgacttcatcgtcggcttcccgggcgagaccgaggccgacttc
gagcagacgatggcgctggtggaagacgtgcgcttcgacggcgccttcagcttcatctac
agcccgcgccccggcaccccggcctcgaatctttcggacgaaacaccggccggcgtgaaa
ttggcgagactggcccgacttcagaagaggctgcaggagttttcggagcagtattccgcg
gccatggtcggcagccgccagcgagtcctggtcgagggccacgcccgcaagaacccggcc
gagttggccggccgcaccgaaaacaaccgtgtcgtgaacttcgccggaaatcggcgattg
atcggtaattacgtcgatttacaaattgtccacgcctacccgcacagccttcgcggcgag
gttgtaacggccctcgaagccgcggcccaatcgtga
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