KEGG   Usitatibacter rugosus: DSM104443_01349
Entry
DSM104443_01349   CDS       T06990                                 
Name
(GenBank) hypothetical protein
  KO
K06915  DNA double-strand break repair helicase HerA and related ATPase
Organism
uru  Usitatibacter rugosus
Brite
KEGG Orthology (KO) [BR:uru00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:uru03400]
    DSM104443_01349
DNA repair and recombination proteins [BR:uru03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Archaeal homologous recombinant proteins
     DSM104443_01349
SSDB
Motif
Pfam: HerA_C DUF87 AAA_22 AAA_10 FtsK_SpoIIIE ResIII AAA_16 TrwB_AAD_bind T2SSE ORC-CDC6-like AAA_30 AAA_7 AAA_28 AAA_19 CbiA nSTAND3 AAA_6 P-loop_TraG
Other DBs
NCBI-ProteinID: QJR10295
UniProt: A0A6M4GTF6
LinkDB
Position
complement(1368132..1369649)
AA seq 505 aa
MLPPLLVAKSKEDLGLLPAMANRHGLIAGATGTGKTVTLQTLAERFSSIGVPVFMADVKG
DLAGLAAAGGGNAKVEERVKTLGIEGFAYKASPVAFWDVFGDAGHPVRSTVSEMGPLLLS
RILDLNETQAGVLAAVFKIADDQGLLLLDLKDLRALLQFAGDNAAKFRTQYGNISTASVG
AIQRGLLTLESQGGAKFFGEPALDLSDLMQTVDGKGVINILAADKLLSSPRVYSTLLLWL
LSELFETLPEIGDPEKPKLVFFFDEAHLLFNDAPRELLTRIEQVVRLVRSKGVGVYFVTQ
NPLDVPDTVLGQLGNRVQHALRAFTPRDQAAVKAAATTFRPNPKVKVEEAITELAVGEAL
VSFLDEKGRPLPVERAFVVPPASRLGTVSADERKKVIAESLCAGHYEKAVDRESAYEKLT
ARAEEKTAPPAGSPGGAKGEEESAGGWGGILEKIGLPGAGPAGPKGRTRETAMEAAAKSA
ARAIGSEVGRKVIRGVLGSIFGGRR
NT seq 1518 nt   +upstreamnt  +downstreamnt
gtgcttcctcccctgctggtcgcgaagtcgaaggaagacttgggcctgctgcccgcgatg
gccaaccggcacggcctcatcgccggcgccaccggcaccggcaagaccgtcacgctgcaa
acgctcgccgaaaggttcagctcgatcggcgttcccgtgttcatggccgacgtgaagggc
gacctcgcgggactcgccgcggccggcggcgggaacgcgaaagtggaagagcgcgtgaag
accctcggcatcgagggcttcgcgtacaaggcttcgcctgtcgcgttctgggatgtgttc
ggcgacgccgggcatcccgtccgctccaccgtctcggagatgggcccgctgctgctctcg
cgcatcctggatctcaacgagacgcaggccggcgtgttggcggcggtcttcaagatcgcc
gatgaccagggcctgctgctgctcgacctgaaagacctccgggcgctgctgcaattcgcg
ggcgacaacgcggcgaagttccgcacccagtacggcaacatctcgaccgcgagcgtgggc
gccatccagcgcggcctgctcacgctcgaatcccagggcggcgcgaaattcttcggcgag
cccgcgctcgacctctccgacctcatgcagacggtcgatggcaagggtgtcatcaacatc
ctcgccgccgacaagctgctctcgagcccgcgcgtgtactcgacgctgctgctgtggctg
ctctcggagctcttcgagacccttcccgagatcggcgacccggagaaaccgaagctcgtg
ttcttcttcgacgaagcgcacctgctcttcaacgacgcgcccagggaattgctcacgcgc
atcgagcaggtcgtgcgcctcgtgcgctcgaagggcgtcggcgtctacttcgtcacgcag
aacccgctcgatgtgccggacaccgtgctgggccagctcggcaaccgcgtgcagcacgcg
cttcgcgcattcaccccgcgcgaccaggcggcggtgaaggcggcggcgaccacgttccgt
ccgaatccgaaagtgaaagtggaggaagccatcaccgagcttgcggtcggcgaagcgctc
gtgtccttcctcgacgagaaaggccgtcccctgccggtcgagcgcgccttcgtcgtgccg
cccgcttcccgcctcggcaccgtgagcgccgacgagcgcaagaaggtcatcgccgaatcg
ctctgcgccgggcactatgagaaggcggtcgatcgcgaatcggcctacgagaagctcacc
gcgagagcggaagagaagacggcaccgcccgcgggaagtccgggcggcgcaaaaggcgag
gaagagtccgccggcggctggggcggtatcctcgagaagatcggactaccgggcgcaggc
ccggccgggccgaagggacggacgcgcgagacggccatggaagccgccgccaagagcgca
gcgcgcgccatcgggagcgaagtgggacgcaaggtcatccgcggggtgctggggtcgatc
ttcggcggccggcggtaa

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