KEGG   Usitatibacter rugosus: DSM104443_01634
Entry
DSM104443_01634   CDS       T06990                                 
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
uru  Usitatibacter rugosus
Pathway
uru00010  Glycolysis / Gluconeogenesis
uru00020  Citrate cycle (TCA cycle)
uru00260  Glycine, serine and threonine metabolism
uru00280  Valine, leucine and isoleucine degradation
uru00310  Lysine degradation
uru00380  Tryptophan metabolism
uru00620  Pyruvate metabolism
uru00630  Glyoxylate and dicarboxylate metabolism
uru00640  Propanoate metabolism
uru00670  One carbon pool by folate
uru00785  Lipoic acid metabolism
uru01100  Metabolic pathways
uru01110  Biosynthesis of secondary metabolites
uru01120  Microbial metabolism in diverse environments
uru01200  Carbon metabolism
uru01210  2-Oxocarboxylic acid metabolism
uru01240  Biosynthesis of cofactors
Module
uru_M00009  Citrate cycle (TCA cycle, Krebs cycle)
uru_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
uru_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
uru_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:uru00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DSM104443_01634 (pdhD)
   00020 Citrate cycle (TCA cycle)
    DSM104443_01634 (pdhD)
   00620 Pyruvate metabolism
    DSM104443_01634 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    DSM104443_01634 (pdhD)
   00640 Propanoate metabolism
    DSM104443_01634 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DSM104443_01634 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    DSM104443_01634 (pdhD)
   00310 Lysine degradation
    DSM104443_01634 (pdhD)
   00380 Tryptophan metabolism
    DSM104443_01634 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DSM104443_01634 (pdhD)
   00670 One carbon pool by folate
    DSM104443_01634 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:uru04147]
    DSM104443_01634 (pdhD)
Enzymes [BR:uru01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DSM104443_01634 (pdhD)
Exosome [BR:uru04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DSM104443_01634 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox_3 GIDA Pyr_redox Lys_Orn_oxgnase FAD_binding_2 Thi4 NAD_binding_8 ApbA
Other DBs
NCBI-ProteinID: QJR10570
UniProt: A0A6M4GTA7
LinkDB
Position
complement(1679617..1681044)
AA seq 475 aa
MDTLKVIDTLKVDVAVIGAGTAGLAAYRAVKARGGKAVVIEGGPYGTTCARVGCMPSKLL
IAAAEASHAIDRAPGFGVHVDGVKRIDGRQVMARVKAERDRFVGFVIAGVDKIPEADRIR
GFAEFVDRNTLQVVNGPRISARSIVIATGSRPNVPPILANLGDRLVINDDVFMWDDLPKS
VAVFGPGVIGLELGQSLARLGVRVVVLGRGGRVGPISDPVVKAAAVKAFSRDFCLDPDAH
VARVERKGDEVEVEYVNCDGKTVIERFEYVLAATGRTPNIDKLAIANAHLEPGLFGVPAY
DRKTLQVGDTPIFIAGDAANDMPLLHEAADEGRIAGENAMRFPAVSPGLRRAPLGVVFSD
PQIAIVGGGMAALAKGTFVSGEVSFEDQGRSRVMLRNHGHLCVYGDSADGRFLGAEMVGP
DAEHIGHLLAWALQARMTVAQMLDMPFYHPVVEEGLRTALRDLDAKLREARKIAA
NT seq 1428 nt   +upstreamnt  +downstreamnt
atggacacgctcaaagtgatcgacaccctcaaggtggatgtggctgtcatcggagccggc
accgccgggcttgccgcctatcgcgccgtcaaggcgcggggcggcaaggccgtcgtgatc
gagggcggcccgtacggaacgacctgcgcccgcgtgggttgcatgccgtccaagctgctg
atcgccgcggccgaggcgtcgcacgcgatcgaccgcgctccgggtttcggcgtgcacgtg
gatggcgtgaagcgcatcgacgggcgccaggtgatggcgcgcgtgaaggccgagcgcgac
cgcttcgtgggcttcgtcatcgcgggcgtggacaagatccccgaggcggaccgcatccgc
ggcttcgccgagttcgtggaccgcaacaccctccaggtcgtgaacgggccgagaatttcc
gcgcgctcgatcgtgatcgccacgggctcgcgtccgaatgtcccgccgatcctcgccaac
ctcggcgaccggctcgtcatcaacgacgacgtcttcatgtgggacgacctgcccaaatcc
gtcgcggtcttcggccccggcgtgatcgggctcgagctgggccagtcgctcgcgcgcctc
ggcgttcgcgtcgtggtgctggggcgcggcggccgcgtcggtccgatctcggatccggtg
gtgaaggccgcggccgtcaaggccttctcgcgtgacttctgcctcgatcccgatgcgcac
gtcgcgcgcgtggagcgcaagggcgacgaagtcgaagtggagtacgtgaactgcgacggc
aagaccgtgatcgagcgtttcgagtacgtgctcgccgcgaccggccgcacgcccaacatc
gacaagctcgcgatcgccaatgcgcatctcgagccgggcctcttcggcgtgcccgcgtac
gaccgcaagacgctccaggtcggcgacacgccgatcttcatcgcgggcgacgcggcgaac
gacatgccgctcttgcacgaagcggccgacgaaggccgcatcgccggcgagaacgcgatg
cgcttcccggccgtctcgccgggcctgcgccgcgctccgctcggcgtggttttctccgat
ccgcagatcgcgatcgtgggcggcggcatggcggcgctcgccaagggcacgttcgtttcg
ggcgaagtctcgttcgaggaccaaggtcgttcgcgcgtgatgttgcgcaaccacggccac
ctctgcgtctacggcgattccgccgacggccgcttcctcggtgccgagatggtgggcccg
gacgccgagcacatcggccacctgctcgcgtgggcgctgcaggcgcgcatgaccgtggcg
cagatgctcgacatgcccttctaccacccggtggtcgaggaaggcctgcgcacggcgctg
cgcgacctggacgccaagctgcgagaagcccgcaagatcgccgcctga

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