Usitatibacter rugosus: DSM104443_02115
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Entry
DSM104443_02115 CDS
T06990
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
uru
Usitatibacter rugosus
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uru03032
]
DSM104443_02115
03400 DNA repair and recombination proteins [BR:
uru03400
]
DSM104443_02115
Enzymes [BR:
uru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DSM104443_02115
DNA replication proteins [BR:
uru03032
]
Prokaryotic type
DNA Topoisomerases
DSM104443_02115
DNA repair and recombination proteins [BR:
uru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DSM104443_02115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QJR11044
UniProt:
A0A6M4GX15
LinkDB
All DBs
Position
2243203..2244297
Genome browser
AA seq
364 aa
AA seq
DB search
MSPLAATRGLRYATDREPGLSRHAQGDGFAYRNARGKAVHDERTLERIRSLAIPPAWTDV
WICRDASGHLQAVGHDARGRKQYRYHPMWRAEREAGKYDHLKAFGELLPSIRRRVASDLR
LPGLPREKVLATLVRLLDRTALRVGNERYARDNGSYGLTTLRGRHVKVNGSRVAFSFRGK
GGKNQAVALDDVRLAKLVRKLRDLPGQELFQYVDDTGAVRDIGSSDVNGYLQEISGDDDV
SAKDFRTWTASVLVANALAVAERPETRASLKEAIESAAKCLGNTPTICRKSYVHPSVMDT
RLWLEALNARRKVRRYPGLRQDEGLLMSVLGLEREARAKPLADVLKASLRAAARKKAEAP
RAAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgctcgccgcgacgcgcgggcttcgctatgccaccgatcgcgagccgggactt
tcgcgccatgcgcagggcgacggcttcgcctatcgcaacgcccgcggcaaggcggtgcac
gacgagcggacgctggagcgcatccgctcgctcgcgattccgcccgcgtggaccgacgtc
tggatctgccgcgatgcatccgggcacttgcaggcggtgggccacgacgcgcgcggccgc
aagcagtaccgttaccacccgatgtggcgcgccgagcgcgaggccggcaagtacgatcac
ctgaaggcattcggcgagctgctgccgtcgattcgccggcgtgtcgcttcggacctgcgg
ttaccggggcttccgcgcgagaaggtgctggcgaccctcgtgcgcctgctcgaccgcacc
gcgcttcgcgtgggtaacgaacgctacgcacgcgacaacggttcctacggtctcacgacg
ctgcgcggccggcacgtgaaggtgaacggctcgcgcgtggcattcagcttccgcggcaag
ggcgggaagaaccaggccgtggcgctggacgacgtgcgcctcgcgaagctggtgagaaag
ctgcgcgacctccccggccaggagctcttccagtacgtcgacgacacgggcgccgtccgc
gacatcgggtcctcggacgtcaacgggtacctgcaggagatctcgggcgacgacgacgtg
agcgcgaaggacttccgcacgtggacggcgagcgtgctcgtggcgaacgccctcgccgtc
gccgagcgtcccgagacgcgcgcctcgctgaaggaagcgatcgagtcggcggcgaagtgc
cttggcaacacgcccaccatctgccggaagagctacgtgcacccgtccgtgatggacacg
cggctgtggctggaggcgctgaacgcgcgccgcaaggtccgtcgctacccggggctgcgg
caggacgaaggcttgctgatgagcgtgctgggcctcgagcgcgaggcccgcgcgaagccg
cttgcggacgtgctgaaagcgtcgctacgagcggccgcccgcaagaaggcggaggcgccg
cgcgccgccgcctga
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