Usitatibacter rugosus: DSM104443_02482
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Entry
DSM104443_02482 CDS
T06990
Symbol
gcvP
Name
(GenBank) Glycine dehydrogenase (decarboxylating)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00260
Glycine, serine and threonine metabolism
uru00630
Glyoxylate and dicarboxylate metabolism
uru00670
One carbon pool by folate
uru00785
Lipoic acid metabolism
uru01100
Metabolic pathways
uru01110
Biosynthesis of secondary metabolites
uru01200
Carbon metabolism
Module
uru_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSM104443_02482 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSM104443_02482 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
DSM104443_02482 (gcvP)
00670 One carbon pool by folate
DSM104443_02482 (gcvP)
Enzymes [BR:
uru01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
DSM104443_02482 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
QJR11407
UniProt:
A0A6M4H0S5
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All DBs
Position
complement(2672474..2675359)
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AA seq
961 aa
AA seq
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MPDIPVKGARESLDALEDHGAFARRHIGPDAVEVAQMLGLLGHGSLDALMDAVIPPAIRR
KSPMKLGRAMHEAEALAEIRRIAAKNKVFKSYIGQGYYGTHTPGVILRNVLENPAWYTAY
TPYQPEISQGRLEALINFQTMVTDLTGLAIANASMLDEATAAAEAMTLCARSAKGEAKVF
AVADDVLPQTIDVVRTRAKPLGIEVRVMPAGQLAEAPAFAVLVQYPGTDGELRDYRSLAA
AVHQRGGFVIAAADLLALVLVDAPGDWGADVAVGSAQRFGVPMGFGGPHAGYMAVRDELK
RSMPGRLVGVTVDAQGERAYRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGP
QGLERIARRTHRLASILKAGLVKLGFAVPTGHFFDTITVAAGEASREIGDRAVAAGVNLR
RSGVLLGISLDETTVPADVENLWRIFAGEDVGFTAASLDARVDDAIPAALARKSPFLTHP
VFNRHHSETEMLRYLRKLADKDVALDRSMIPLGSCTMKLNATSEMIPVTWPEFGAIHPFA
PVDQWQGYSELIVGLEKMLCQATGYDAVSLQPNAGSQGEYAGLLAIKAYHESRGEGHRNV
CLIPTSAHGTNPASAQMVGMKVVVVASTDEGEVDLADLKKKADEHAHDLAAIMVTYPSTH
GVFETGIVEICDVVHKHGGQVYVDGANLNAMVGLAAPGQFGGDVSHLNLHKTFCIPHGGG
GPGVGPVAVKAHLARFLPGHRHLEAAPGGIGPVSAAPFGSASILPISWMYIEMMGGEGLK
RASEVAILNANYIARRLAPHYPVLYSGPGGLVAHECILDLRPIKESSGITVDDVAKRLID
YGFHAPTMSFPVAGTLMVEPTESESKLELDRFCEAMIAIREEIRAVEEGKLDPEDNPLRN
APHTAAVVIGDDWKRKYSRELAAYPLKSLRDSKYWSPVGRADNVYGDRNLFCSCVPLAEY
E
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacattcccgtgaagggtgcgcgcgagtcgctcgacgcgctcgaggaccacggc
gccttcgcgcgccgccacatcggacccgatgccgtcgaggtcgcgcagatgctgggcctg
ctgggccacggctcgctggacgccctcatggacgcggtgatcccgcccgccatccgccgc
aagtcgccgatgaagctggggcgagcgatgcacgaggccgaggcgctcgccgagatccgc
cgcatcgccgcgaagaacaaggtgttcaagagctacatcgggcagggctactacggcacg
cacacgcccggcgtgatcctccggaacgtcctcgagaatcccgcgtggtacacggcgtac
acgccgtaccagccggagatctcgcagggtcggttagaagcgctgatcaacttccagacg
atggtgaccgacctcacgggcctcgccatcgccaacgcgtccatgctggacgaggcgacc
gcggccgccgaagcgatgacgctgtgcgcgcgctcggcgaagggcgaggcgaaggtcttc
gccgtcgccgacgacgtgctgccgcagacgatcgacgtcgtgcgcacgcgcgcgaagcct
ctgggcatcgaggtgcgcgtcatgccggcgggacagctcgcggaggctccggctttcgcg
gtgctggtgcagtaccccggcacggacggcgagctgcgcgactatcgcagcctcgccgcg
gccgtgcaccagcgcggtggtttcgtgatcgccgcggccgatctcctcgccctcgtgctg
gtcgatgcgcccggtgattggggcgcggacgtcgcggtgggctcggcgcagcgcttcggc
gtgccgatgggcttcggcggcccgcacgccggctacatggcggtgcgagacgagctgaag
cgcagcatgcccggacgcctggtcggagtgaccgtcgatgcgcagggcgagcgcgcctac
cgcctcgcgttgcagacccgtgagcaacacatccgccgcgagaaggcgacctccaacatc
tgcacggcgcaggtgctgctggcggtgatggcgtcgatgtacgcggtgtatcacgggccg
caggggctggagcgcatcgcgcggcgcacgcaccggttggcctcgatcctcaaggcgggt
ctcgtgaagctcggcttcgcggtgccgacgggccacttcttcgacacgatcaccgtggcg
gcgggcgaagcctcgcgcgagatcggcgatcgcgccgtcgcggccggcgtgaacctgcgc
cgctccggcgtgctgctcggcatctcgctcgacgagacgacggtcccggccgacgtcgag
aacctctggcgcatcttcgcgggcgaggacgtgggcttcaccgccgcgtcgctcgacgcg
cgcgtcgacgatgcgatccccgcggccctcgcgaggaaatcgccgtttctcacgcatcct
gtcttcaaccggcaccactccgagacggagatgctgcgctacctgcggaagctcgccgac
aaggacgtggcgctcgaccgctccatgatcccgctgggctcgtgcacgatgaagctcaat
gccacgagcgagatgatccccgtgacatggcccgagttcggcgccatccacccgttcgcg
cccgtggaccagtggcagggctacagcgagctgatcgtcggcctcgagaagatgctctgc
caggccaccggctacgacgcggtgtcgttgcagcccaacgccggctcgcaaggtgagtac
gcgggcctgcttgcgatcaaggcgtatcacgagagccgcggcgaggggcaccgcaacgtc
tgcctcatccccacgtccgcgcacggcaccaacccggcgtcggcgcagatggtcggcatg
aaggtcgtcgtggtcgcttcgacggacgagggcgaggtcgaccttgccgacctgaagaag
aaggccgacgagcacgcgcacgacctcgccgccatcatggtcacgtacccgtccacgcac
ggcgtgttcgagaccggcatcgtcgagatctgcgacgtcgtgcacaagcacggcggccag
gtgtacgtggacggggcgaacctgaacgcgatggtgggcttggcggcgccgggccagttc
ggcggcgacgtctcgcacctgaacctgcacaagacgttctgcatcccgcacggcggcggc
gggcctggtgtcggtccggtcgcggtgaaggcgcacctggcgagattcctgccgggccat
cggcacctcgaagcggctcccggcggcatcggcccggtgtcggccgcgccgttcggcagc
gcctcgatcctgccgatctcgtggatgtacatcgagatgatgggcggcgagggcctgaag
cgggcgagcgaggtcgcgatcctcaatgccaactacatcgccaggcgcctcgcgccgcac
tacccggtgctgtactcgggcccggggggattggtggcgcacgagtgcatcctcgacctg
cggccgatcaaggaatcgtccggtatcaccgtggacgacgtcgccaagcgcctcatcgac
tacggcttccacgcgccgacgatgtccttccccgtcgccggcacgctgatggtggagccg
acggagagcgaatcgaagctcgagctcgaccgcttctgcgaggcgatgatcgcgatccgc
gaggagatccgcgccgtggaggaggggaagctcgacccggaagacaacccgcttcgcaac
gctccgcacaccgcggccgtggtgatcggcgacgactggaagcggaagtactcccgcgag
ctcgccgcctatccgttgaagagcctgcgggactccaagtactggtcgcccgtcggtcgc
gccgacaacgtctacggcgaccgcaacctcttctgcagctgcgtgccgctcgccgagtac
gaatga
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