Usitatibacter rugosus: DSM104443_03352
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Entry
DSM104443_03352 CDS
T06990
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00541
Biosynthesis of various nucleotide sugars
uru01100
Metabolic pathways
uru01250
Biosynthesis of nucleotide sugars
Module
uru_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DSM104443_03352 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
uru01005
]
DSM104443_03352 (kdsA)
Enzymes [BR:
uru01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
DSM104443_03352 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
uru01005
]
Lipid A
DSM104443_03352 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
NeuB
Motif
Other DBs
NCBI-ProteinID:
QJR12267
UniProt:
A0A6M4H370
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Position
complement(3587700..3588536)
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AA seq
278 aa
AA seq
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MKLCGFEVGLEKPFFLIAGPCVVESEQLQMDTAGKLQEMTKELGIPFIFKSSYDKANRSS
GKSFRGPGMEKGLEILAKVKKDLGVPILTDVHTEAEVPMVAKIVDVLQTPAFLCRQTDFI
HAVARSGKPVNIKKGQFLAPGDMKNVVDKAREASGSDTIMVCERGASFGYNNLVSDMRSL
AIMRETGCPVVFDATHSVQLPGGQGTTSGGQREFVPVLARAAIATGVAGVFMETHPDPSK
ALSDGPNAWPLPKMRELLSVLKEIDFLVKQRGLAERSL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgtgtggattcgaagtcggactcgagaagccgttctttctcatcgcgggcccg
tgcgtggtcgagagcgagcagctccagatggataccgcgggcaagctccaggagatgacg
aaggagctgggcatcccgttcatcttcaagagcagctacgacaaggccaaccgcagctcg
ggcaagtcgttccgcggcccggggatggagaagggcctcgagatcctcgccaaggtgaag
aaggacctcggcgttccgatcctcacggacgtgcacaccgaagccgaagtgccgatggtc
gcgaagatcgtcgacgtgctgcagacgcccgcgttcctctgccgccagactgatttcatc
catgccgtcgcgcgttccggcaagcccgtgaacatcaagaagggccagttcctggcgccc
ggcgacatgaagaacgtcgtcgacaaggcgcgcgaggcgagcggctcggacaccatcatg
gtctgcgagcgcggcgcttcgttcggctacaacaacctggtctccgacatgcgctcgctc
gcgatcatgcgcgaaaccggttgccccgtcgtcttcgatgccacgcattcggtgcagcta
cccggcggccagggcacgacgtccgggggccagcgtgagttcgtcccggtgctggcgcgt
gccgccatcgcgaccggtgtcgccggcgtcttcatggaaacgcacccggatccctcgaag
gcgctttccgatggccccaatgcttggccgctgccgaagatgcgcgagctcctgtccgtg
ttgaaagagatcgacttcctggtcaaacaacgcggcctcgccgagcgttccctgtaa
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