Usitatibacter rugosus: DSM104443_03722
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Entry
DSM104443_03722 CDS
T06990
Name
(GenBank) hypothetical protein
KO
K02674
type IV pilus assembly protein PilY1
Organism
uru
Usitatibacter rugosus
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
uru02044
]
DSM104443_03722
02035 Bacterial motility proteins [BR:
uru02035
]
DSM104443_03722
Secretion system [BR:
uru02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
DSM104443_03722
Bacterial motility proteins [BR:
uru02035
]
Pilus system
Pilus assembly proteins
DSM104443_03722
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T4P_PilY1
PQQ
Motif
Other DBs
NCBI-ProteinID:
QJR12631
UniProt:
A0A6M4GZG6
LinkDB
All DBs
Position
complement(3953692..3958218)
Genome browser
AA seq
1508 aa
AA seq
DB search
MRIQQTLRRSFIALVTGSLLGTFAGLAPLGANAQVAQLADVPLAQAPSTSVLPNLMYILD
DSGSMGYNYMPDQVQLNSAQYAFRHCKVCKAPNKVNTTSPTNRQVTAVDTGSTKERITLS
GAHGGTTGTAFRFTAGTPPSPLALNVTYYMRDINGTTAFSVALASGGSAVNLLTNPTGAT
FTIYDADFTTVSNHGGSVGQTVVFTSGTPPSPLTLNTVYYITLAGSDGKTLQVSATSGGS
PIVLTDAGSSATLDVNGGYCQGPGTPAPQNNTGLGNGEGMACGTDQGQDANVHSRSSSPE
VAEALFYAPVFNKIWYNPAISYAPAVDSTGTSLGNIDSKNATSDYFMKGAAKNLTTAFNE
VVYCNTTTPSTADLLDTTKCRRNGKDNVPSGYFTYYKATAPGNEGYPNSVFFNKEQLTTS
NPHYYNIAPVEHCKDENLTECMLTTTPSGDFSKPAPLRWCNTKADATTTAVVSSTSNPKC
RKKFEFSTNYIFPRFGRFSRVDIVTSTANYAKVTGAVRPDCVAATTCTYAEEVQNFANWY
GYYRIRMALMKTATGRAFLSIDDRYRVGFITINPGDPVSVDKYLKVGQFVADQRKNWYEK
LYASSGTSGTPLREALSRVGRYYAGQKDRINSGMRDKSGTDDPVQYTCQANYALLTTDGY
WNQATNQPGQQIDGSNIPDKDGTQSAPFITRATGTWDGGSGASGSLADVAAYYYIEDLRP
DMTDNVPTQSGKADDNNKQHMVTFGLGLGLEGLMDYIPDYDTRLSGDFYKIKQGASNCSW
KTGVCDWPVPVENQPATLDDLWHAAVNGRGAYFSASDPNSLAQGLLSALSKLKVATAAAS
ASATSSPNITESDNYIFSSTFRTGIWDGEIVAQRIDIKTGKVIPGIEWAAQALLDARAAD
ATDSRLIYTIDEGGASKRKDFKYASLKAAAAGAIAAEQPYFASKCGAFGQCVLLTADQQA
IANDGTNLVNYLRGQRQHEKIATGESTPSFRKRDHILGDVVNASPVFVGSPFFAYNDAVS
PTYEDYKTAQDARTPVLYAAANDGMLHALNANTGQELWSYVPRMVMPNLHKLANANWGAT
HRFSVDGTPSTADVFVGGAWKTILVAGLSSGGRGFYALDVTNPASPVVLWEICADASLCA
IVDTDLGFSYGNAEIGKRKFDGKWVVYITSGLNNITPGTGKGFLYVLDLATGAVLNKVAT
GEGTVAAPTGFSRISGFVADPQKDRTITTIYGGDLFGNVYRFDTSVNPPVKTVLATLKDK
GGKPQSVTTRPELTAIRAGTKASDPVYPVVYVGTGRYLGIDDLKDPAKLVPAQPFAYENS
LYAIKDKGLGGTYANFRTANVVENVLTDKGTSRTATNKTVNWAVNDGWFIDLNPNNTTPG
ERINLDPLLVSGILVVVGNIPNNEQCSIGGDAFAYFFSYNSGGFPDPAGFTTVGQKITGQ
TIVGYTSITGVRPPAPGDKPGDPPPEIPDLKCRIIFTLATGEKITLPCPQIGGAGVPRRT
SWRELIQK
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgagaatccaacagacacttcgccgctcgttcatcgccctcgtcaccggatcgctgctc
ggcaccttcgccggactggcgcccctgggcgcgaacgcccaggtcgcccagctcgccgat
gtgccgctggcgcaggcgccatcgacctcggtgctgccgaacctcatgtacatcctggat
gactcggggtcgatgggctacaactacatgcctgaccaggtccagctgaacagcgcccag
tacgcgttccggcattgcaaggtctgcaaggcgccgaacaaggtgaacacgaccagcccg
acgaaccgccaggtgaccgccgtggacaccggcagtaccaaggagcgcatcacgctctcc
ggcgcgcatggcggcacgaccggcaccgcgttccggtttacggccggcacgccgccctcg
cccctcgcgctcaacgtgacgtactacatgagggacatcaacggaacgacggcgttctcc
gtggccctcgcatccggcggctcggcggtcaacctgctgaccaatccgacgggtgccacg
ttcaccatctacgacgccgacttcaccacggtgagcaaccacggtgggtccgtcggccag
accgtcgtgttcacctcgggaactcccccgtcgcccttgacgctcaacaccgtctactac
atcacattggcgggttcggacggcaagacgctccaggtctcggcgacgtcgggcggatct
cccatcgtcctcacggacgcgggctccagcgccacgctcgacgtgaacggcggctactgc
cagggcccgggcacacccgcgccgcaaaacaacaccggcctgggaaatggcgagggcatg
gcctgcggaacggaccaaggccaggacgccaacgtccacagccggagttccagtccggaa
gtcgccgaggcgctcttctacgcgccggtcttcaacaagatctggtacaacccggctatc
agctacgcgcctgccgtggactccaccggcacgagcctgggcaacatcgattccaagaac
gccaccagcgactacttcatgaagggtgcggcgaagaatctcacgaccgccttcaacgag
gtcgtctattgcaacaccacgacccccagtacggcagacctgctcgatacgacgaagtgc
aggcgcaacgggaaggacaacgtcccgagcggctacttcacgtactacaaagccaccgcc
ccgggcaacgagggctatccgaacagcgtgttcttcaacaaggaacagctcaccaccagc
aacccccactactacaacatcgccccggtcgagcattgcaaggacgagaacctgacggag
tgcatgctcaccacgacgcccagtggcgacttcagcaagcccgcgccgctccgctggtgt
aacacgaaggcggatgcgacgaccacggcggtcgtgtcctcgacgtcgaacccgaagtgc
cgcaagaagttcgagttcagcaccaactacatctttccgcgcttcggccgcttctcgcgc
gtcgacatcgtcacgtcgaccgcgaactacgccaaggtgaccggcgcggtgcgtccggac
tgcgtcgcggcgacgacctgcacgtacgcggaggaggtgcagaacttcgccaactggtac
ggctactaccgcatccggatggcgctcatgaagaccgcgacgggccgcgccttcctgtcg
atcgacgaccgctatcgcgtcggcttcatcaccatcaacccgggcgatccggtgtccgtg
gacaagtacctcaaggtcggccagttcgtggcggatcagcgcaagaattggtacgaaaag
ctctacgcctcttccgggaccagtggcacgccgcttcgcgaggcgctgtcgcgcgtcggc
cgctactacgccggccagaaggacaggatcaacagcggcatgcgcgacaagtcgggaacc
gacgacccggtccagtacacgtgccaggcgaactacgcgctgctcacgacggacggctac
tggaaccaggccaccaaccagccgggccagcagatcgacgggtccaacatcccggacaag
gacggcacccaatcggctcccttcatcacgcgggcgacggggacctgggacggcggcagc
ggcgccagcgggtcgctcgccgacgtggcggcttactactacatcgaagacctgcggcct
gacatgacggacaacgtgccgacccagagcggcaaggcggacgacaacaacaagcagcac
atggtgacgttcggcctggggctcggcctcgaggggctgatggactacatccccgactac
gacacccggctgtccggcgatttctacaagatcaagcaaggtgccagcaactgctcgtgg
aagacgggcgtctgcgactggccggtcccggtggagaaccaaccggccaccctggacgac
ctctggcatgcggcggtgaacgggcgtggcgcgtacttcagcgcgagcgacccgaactcg
ctggcccagggcctgctgtcggcactgtcgaagctcaaggtcgcgacggccgcggcgtcc
gcctcggcgacgtccagccccaacatcacggagagcgacaactacatcttctcgtccacc
ttccgcaccggcatctgggacggcgagatcgtggcgcagcggatcgacatcaagacgggc
aaggtcatcccgggcatcgaatgggcggcccaagccctcctcgacgcacgcgctgccgat
gccaccgactcgcgcttgatctacacgatcgacgaaggcggcgccagcaagcgcaaggac
ttcaagtacgcctccctcaaggccgctgcggccggggcgattgccgcggaacaaccgtac
ttcgccagcaagtgcggggcgttcggccaatgcgtactgctcacggccgaccagcaggcg
atcgccaacgacggcacgaacctcgtgaactacctgcggggccagcgccagcacgagaag
atcgcgaccggggagagcactccgtcgttccgcaagcgcgaccacatcctcggcgacgtg
gtgaacgccagcccggtcttcgtcggctcgccgttcttcgcctacaacgatgcggtttcg
ccgacgtacgaggactacaagacggcgcaggacgcgcgtacgccggtgctgtatgcggcg
gcgaacgacggcatgctccacgccctcaacgccaacaccggccaggagctgtggtcgtat
gtcccgcgcatggtgatgcccaacctgcacaagctcgccaacgccaactggggcgcgaca
caccgcttcagcgtggatggcacgccgtcgacggccgacgtcttcgtgggcggcgcttgg
aagacgatcctcgtcgccggcctcagctcgggcggacgcggtttctacgcgctcgacgtg
accaacccggccagcccggtcgtgctgtgggagatctgcgcggatgcctcgctgtgcgcg
atcgtcgacaccgacctcggcttctcgtatggcaacgcggagatcggcaagcgcaagttc
gacggcaagtgggtggtgtacatcacctcgggcctgaacaacatcacccccggcacgggc
aagggcttcctgtatgtcctggacctcgcgacgggcgcggtgctgaacaaggtcgccacc
ggcgagggaaccgtcgcggcgcccaccggcttctcccgcatctcgggattcgtcgccgat
ccgcagaaggaccgcacgatcaccacgatctatggcggcgacctcttcggcaacgtgtac
cgcttcgacacgagcgtgaacccgccggtgaagaccgtcctcgccacgctgaaggacaag
ggcggcaagccccagtcggtcacgacgcgccccgagctgacggcgatccgcgcgggcacg
aaagcctcggacccggtctacccggtcgtttatgtcggcacgggccgctacctgggcatc
gacgacctgaaggatccggccaagctggtgccggcgcagccgttcgcctatgagaactcg
ctctacgccatcaaggacaagggcctgggcgggacgtacgcgaacttccggacggccaac
gtggtggagaacgtcctcacggacaagggcacgtcccgcacggcgacgaacaagacggtg
aactgggcggtcaacgacggctggttcatcgacctgaatccgaacaacacgacaccgggc
gagcgcatcaacctcgatccgttgctggtttccgggattctcgtcgtggtcggtaacatc
cccaacaacgagcagtgctcgatcggtggcgatgccttcgcgtacttcttctcgtacaac
agcggtggattccccgaccccgcgggattcacgaccgtcggccagaagatcaccggccag
acgatcgtcggatacacgtcgatcacgggcgtgcgtcccccggctccgggtgacaagccg
ggcgacccgccgccggagatcccggacctgaagtgccgcatcatctttaccctggccacg
ggcgagaagatcacgctcccgtgcccccagatcggtggtgcaggtgtaccgcgccggacc
tcgtggcgcgagctgatccagaagtaa
DBGET
integrated database retrieval system
