Usitatibacter rugosus: DSM104443_03912
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Entry
DSM104443_03912 CDS
T06990
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
uru
Usitatibacter rugosus
Pathway
uru02024
Quorum sensing
uru03060
Protein export
uru03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
DSM104443_03912 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
DSM104443_03912 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM104443_03912 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
uru02044
]
DSM104443_03912 (ffh)
Enzymes [BR:
uru01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
DSM104443_03912 (ffh)
Secretion system [BR:
uru02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
DSM104443_03912 (ffh)
Eukaryotic Sec-SRP protein
DSM104443_03912 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
Zeta_toxin
AAA_22
AAA_30
AAA_16
Helicase_RecD
APS_kinase
cobW
AAA_24
AAA_31
KTI12
AAA_18
AAA_33
AAA_14
ABC_tran
TFC3_eWH
DnaB_C
LPD22
ResIII
AAA_5
nSTAND3
NACHT
TsaE
Motif
Other DBs
NCBI-ProteinID:
QJR12819
UniProt:
A0A6M4H002
LinkDB
All DBs
Position
complement(4140162..4141514)
Genome browser
AA seq
450 aa
AA seq
DB search
MLDALTQRLSSVVKTLRGHARLTEENIQEALREVRLALLDADAGLPVVKEFVARVKEKAL
GQEVVGSLTPGQALVGVVNAELVNLMGGVGEGLNLAQQPPAIVLLAGLQGAGKTTSAGKL
ARLLTKTTKKKVLLVSTDVYRPAAIDQLATLAKTLEVDLFPSDPSQKPVSIAANALDWAK
KHYYDVLIVDTAGRLAIDEAMMAEVKAIHAALNPVETLFVVDAMQGQDAVNVAKAFSEAL
PLTGVVLTKLDGDSRGGAALSVRHVTGKPIKFVGVSEKLDGLEAFHPDRMASRILGMGDI
LSLVEDARSRVDEKEAQKLADKFKKGKDFDLEDFKAQLQQMKKMGGVASMMDKLPAQLTQ
MASASPDLGEKALRRTEGIINAMTPQERRKPEILKASRKRRIAAGAGVPVQEVNQLLNKF
EQMQKMMKMMRTGGLAKMMRNMKGMLPGMR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgccctgacgcaacgcctctcctccgtcgtgaagacgctgcgcggtcacgcg
cgcctgaccgaggagaacatccaggaagccctgcgcgaggtccgcctggcgctgctcgac
gccgacgcgggcctgccggtggtgaaggaattcgtcgcgcgcgtgaaggaaaaggcgctc
ggccaggaagtggtcggcagcctcacgccgggccaggcgctggtgggcgtggtgaacgcg
gagctcgtgaacctcatgggcggcgtgggcgaggggttgaacctcgcgcagcagcctccc
gccatcgtgctgctcgccggcctccagggcgcgggcaagacgacctccgcgggcaagctc
gcgcgcctgctcacgaagaccaccaagaaaaaggtgctgctggtctccaccgacgtctac
cgccccgcggccatcgaccagctcgccaccctcgcgaagacgctcgaggtcgacctcttc
ccctcggacccgtcgcagaagccggtctcgatcgccgccaacgcgctcgactgggcgaag
aagcattactacgacgtgctcatcgtcgacaccgccggccgcctcgcgatcgacgaggcg
atgatggccgaggtgaaggcgatccacgcggcattgaatccggtcgagacgctcttcgtc
gtggacgcgatgcagggccaggacgcggtgaacgtcgcgaaggcgttctccgaggcgctc
ccgctcacgggcgtggtgctcaccaagctcgacggcgattcgcgcggcggcgcggcgctc
tcggtgcgccacgtcaccggcaagcccatcaagttcgtcggcgtctcggagaagctcgac
ggcctcgaggccttccacccggaccgcatggcctcgcgcatcctcggcatgggcgacatc
ctctcgctggtcgaggacgcgcgctcccgggtcgacgagaaggaagcgcagaagctcgcg
gacaagttcaagaagggcaaggacttcgacctcgaggacttcaaggcccagctccagcag
atgaagaagatgggcggcgtggcctcgatgatggacaagctgcccgcgcaactcacgcag
atggcctcggcctcgcccgacctgggcgagaaggcgctgcgccgcaccgagggcatcatc
aatgcgatgacgccgcaggagcgccgcaagcccgagatcctcaaggcctcgcgcaagcgc
cgcatcgccgccggcgcgggcgtgccggtgcaggaagtgaaccagctgctcaacaagttc
gagcagatgcagaagatgatgaagatgatgcgcaccggcggcctcgccaagatgatgcgc
aacatgaagggcatgctgcccggcatgcggtag
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