Usitatibacter rugosus: DSM104443_04145
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Entry
DSM104443_04145 CDS
T06990
Symbol
exoA
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
uru
Usitatibacter rugosus
Pathway
uru03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM104443_04145 (exoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uru03400
]
DSM104443_04145 (exoA)
Enzymes [BR:
uru01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
DSM104443_04145 (exoA)
DNA repair and recombination proteins [BR:
uru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
DSM104443_04145 (exoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QJR13051
UniProt:
A0A6M4H0M3
LinkDB
All DBs
Position
complement(4384211..4384984)
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AA seq
257 aa
AA seq
DB search
MRIVTLNVNGLRSAAAKGFLPWMKRQKPDIVCLQEIKAQEADLSKELLAPPGFHAFFHPA
EKKGYAGVAIYTKYEPDKVVIGLGIKDIDQQGRFLQVDIGKLSVISLYLPSGSSGEEAQA
RKFSFMERFLPRLEQMHKCGREIVLCGDWNIAHKEIDLRNWRSNQKNSGFLPEERKWMTE
IFERVGWVDAFRVVEQGPDHYTFWSNRGDAYNKNVGWRIDYQVATPGIGKLARKASIYKT
KRFSDHAPLTIDYDYKI
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgtgacgttaaatgtgaacgggctgcgctccgcggccgccaagggcttcctg
ccctggatgaagcgccagaagcccgacatcgtgtgcctgcaggagatcaaggcgcaggaa
gccgacctttcgaaggagctcctcgcgccgccgggctttcacgccttcttccatccggcc
gagaagaagggctatgcgggcgtggccatctacacgaagtacgagcccgacaaggtcgtc
atcggactcggcatcaaggacatcgatcaacagggccgtttcctgcaggtggatatcggc
aagctctcggtgatctcgctctatcttccatcgggctccagcggcgaggaagcgcaggcg
cgcaagttctccttcatggagcgcttcctgccgcgcctggagcagatgcacaaatgcgga
cgcgagatcgtgctgtgcggcgactggaacatcgcgcacaaggagatcgatctgcgcaac
tggcgctcgaaccagaagaactcgggcttcctccccgaggagcggaagtggatgacggag
atcttcgagcgcgtgggctgggtcgatgccttccgcgtcgtcgagcagggccccgaccac
tacacgttctggtcgaaccgcggcgacgcgtataacaagaatgtcggttggcgcatcgac
taccaggtcgccacccccgggatcggcaagctcgcgcgcaaggcttcgatctacaagacg
aagcgcttctccgaccacgcgccgctcaccatcgactacgactacaagatctag
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