Usitatibacter rugosus: DSM104443_04173
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Entry
DSM104443_04173 CDS
T06990
Symbol
lysA
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
uru
Usitatibacter rugosus
Pathway
uru00300
Lysine biosynthesis
uru00470
D-Amino acid metabolism
uru01100
Metabolic pathways
uru01110
Biosynthesis of secondary metabolites
uru01120
Microbial metabolism in diverse environments
uru01230
Biosynthesis of amino acids
Module
uru_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSM104443_04173 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSM104443_04173 (lysA)
Enzymes [BR:
uru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DSM104443_04173 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QJR13079
UniProt:
A0A6M4H0P9
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All DBs
Position
4409590..4410846
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AA seq
418 aa
AA seq
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MSTLQRKDGALAMEGVPLEEVARRFGTPCYVYSRSMIEAAYREFDEGLAGVDHLVCYAVK
ANSNLAILDVLRRLGSGFDIVSGGELSRVRAAGGESSKILFSGVGKSEAEIRFALGERIR
CFNVESEPELERLNALAGAAGTKAAVSLRVNPDVDAKTHPYISTGLAGNKFGIPYGRSLE
VYRHAARLPHLVVSGIDCHIGSQILEASPLEEAVDRVLELADAVIAAGIPLHHVDFGGGF
GIRYREGDRTMDVGHYTRKLAQRMQGRGLQVLLEPGRYIVGNAGVLLTRVEYLKLDKAKR
FAVVDASMSELIRPALYEAWHEIVPVTEAPRERATYDVVGPICESSDVLGTGRELAIAEG
DLLAILSAGAYAMAMASNYNTRPRPPEALVDGDRILAIRARESVESLYAGESTLDKAE
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgctgcaaaggaaggacggcgcgctcgcgatggaaggcgtgccgctcgaggag
gttgcaaggcgcttcggcacgccctgctacgtctattcgcgctcgatgatcgaggcggcg
taccgggagttcgacgaaggcctggcgggcgtggaccacctcgtctgctatgcggtgaag
gcgaactccaacctcgccatcctcgacgtgctgcgcaggctcggcagcggcttcgacatc
gtctcgggcggcgagctctcgcgcgtgcgcgccgcgggcggcgagagctcgaagatcctc
ttctccggcgtcggcaagtccgaggccgagatccgcttcgcgctgggcgagcgcatccgc
tgcttcaacgtggagagcgagccggagctggagcggctgaacgcgctcgccggcgcggca
gggacgaaggccgcggtgtcgctgcgcgtgaatcccgacgtcgacgcgaagacgcatccc
tatatctccacgggcctcgcgggaaacaagttcggcatcccgtacgggcggtcgctcgag
gtctaccggcacgccgcacggcttccgcacctggtggtctcggggatcgattgccacatc
ggctcgcagatcctcgaggcctctccgctcgaggaggcggtcgatcgcgtgctggagctc
gccgacgccgtgatcgccgcgggcatcccgctgcaccacgtcgacttcggcggcggcttc
ggcatccgctaccgcgaaggcgaccgcaccatggacgtcgggcactacacgcgcaagctc
gcccagcgcatgcaggggcgcgggctgcaggtgctgctggagcccgggcgctacatcgtg
ggcaacgcgggcgtgctgctcacgcgcgtggagtacctgaagctcgacaaggcgaagcgc
ttcgccgtggtcgacgcctccatgagcgagctgatccgccccgcgctctacgaggcgtgg
cacgagatcgtccccgtgaccgaggcgccccgggagcgtgcgacctacgacgtggtgggc
ccgatctgcgaatcgtccgacgtgctgggcaccgggcgcgagctcgcgatcgccgaaggc
gatctcctcgccatcctctccgccggggcctatgcgatggcgatggcgtcgaactacaat
acgcgcccgcgccctcccgaggcgctcgtcgacggcgatcgcatcctcgcgatccgtgcg
cgcgaaagcgtcgaatccctctacgccggcgaatcgacgctcgataaggcggagtag
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