Usitatibacter rugosus: DSM104443_04192
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Entry
DSM104443_04192 CDS
T06990
Symbol
phrA
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
uru
Usitatibacter rugosus
Brite
KEGG Orthology (KO) [BR:
uru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uru03400
]
DSM104443_04192 (phrA)
Enzymes [BR:
uru01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DSM104443_04192 (phrA)
DNA repair and recombination proteins [BR:
uru03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DSM104443_04192 (phrA)
Prokaryotic type
DSM104443_04192 (phrA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QJR13098
UniProt:
A0A6M4H1W3
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All DBs
Position
4429969..4431402
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AA seq
477 aa
AA seq
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MKPYPAALFWFRRDLRVEDNAGLYYALTSARRVHCVFVFDREILDALPTRSDRRVEFIHA
SVVELREALRSHGGDLHILHDRAREAIPRLAAELGVDAVFANEDYEPDAIARDAAVDKLL
AAAGRRMHRAKDQAVFDKDEVLTRASQPFSVFTPYKNAWLEKVDDFFLGAYPVAKHAGAL
APSPLPASMPSLEDLGFEATNLSTVGVVPGTAGARALLANFEPRMHDYHKARDFPGVKGV
SYLSVHNRFGTVSIRELARRARAAKGLGPATWLSELVWRDFYFQVLWHHPHAAEGPFRRE
YEAIRWPDDPALFAAWCEGNTGYPLVDAAMRQINTTGYMHNRLRMVVASFLAKDLLVDWR
KGERYFAENLNDFDLAQNNGGWQWAASTGCDAQPYFRIFNPVTQSERFDPKGRFIRRYLP
ELANVPDAFIHAPWTMDAVKQAASGCVIGQDYPAPVVDHAVQREKALALYGKVKGAT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagccttatccggccgccctgttctggttccgccgcgacctgcgcgtcgaggacaat
gccgggctctactacgcgctcacctcggcccgccgggtccactgcgtcttcgtcttcgac
cgcgagatcctcgacgcgttgccgacgcgatcggaccggcgggtggagttcatccatgcc
tcggtcgtggagctgcgcgaagccttgcgatcccacggcggggacctgcacatcctgcac
gaccgcgcacgcgaagccattccacgccttgccgcggagctcggtgtcgatgcggtcttc
gccaacgaggactacgaaccggatgccatcgcgagggatgccgccgtggacaagctgctg
gccgcggcgggccggcggatgcaccgcgccaaggaccaggccgtgttcgacaaggacgag
gtgctgacccgcgcgagccagccgttctccgtcttcacgccctacaagaacgcctggctc
gagaaggtggatgacttcttcctgggtgcctatccggttgcgaagcatgccggcgctctc
gccccttcacctcttcccgcttcgatgccctcgctcgaggacctcggcttcgaggccacg
aacctctccacggtgggcgtggttccgggcacggcgggtgcccgcgcgttgctcgcgaat
ttcgagccgcgcatgcacgactatcacaaggcccgcgacttccccggcgtgaagggcgtg
tcgtatctctcggtgcacaaccgcttcggcacggtgtcgatccgcgagctggcgcggcgt
gcccgcgcagcgaaggggctcgggccggcgacatggctctcggagctggtgtggcgcgac
ttctacttccaggtgttgtggcaccacccgcatgccgccgaggggccgttccgccgcgag
tacgaggcgatccgctggcccgacgatcccgcgctcttcgccgcgtggtgcgaaggcaac
acgggctatccgctcgtggacgccgcgatgcgccagatcaacacgacgggctatatgcac
aaccgcctgcggatggtcgtcgcgtcgttcctggccaaggacctgctcgtcgactggcga
aagggggagcgctatttcgccgagaacctgaacgacttcgacctcgcgcagaacaacggc
ggctggcagtgggccgcatcgacgggatgcgatgcgcagccttacttccgcatcttcaat
ccggtcacgcaatcggagcgcttcgacccgaagggccgcttcatccgccgctacctgccg
gagctcgcgaacgtgcccgacgcattcatccacgcgccgtggacgatggatgccgtgaag
caggcggcttcgggatgcgtcatcgggcaggactatcccgcgccggtggtggatcacgcc
gtgcagcgcgagaaagccctcgcgctgtacggcaaggtgaagggcgcgacctag
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