KEGG   Uruburuella suis: LVJ78_00325
Entry
LVJ78_00325       CDS       T08067                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
usu  Uruburuella suis
Pathway
usu03030  DNA replication
usu03410  Base excision repair
usu03420  Nucleotide excision repair
usu03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:usu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LVJ78_00325 (polA)
   03410 Base excision repair
    LVJ78_00325 (polA)
   03420 Nucleotide excision repair
    LVJ78_00325 (polA)
   03440 Homologous recombination
    LVJ78_00325 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:usu03032]
    LVJ78_00325 (polA)
   03400 DNA repair and recombination proteins [BR:usu03400]
    LVJ78_00325 (polA)
Enzymes [BR:usu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     LVJ78_00325 (polA)
DNA replication proteins [BR:usu03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     LVJ78_00325 (polA)
DNA repair and recombination proteins [BR:usu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     LVJ78_00325 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     LVJ78_00325 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1
Other DBs
NCBI-ProteinID: UOO79518
UniProt: A0AAE9KIS1
LinkDB
Position
69761..72544
AA seq 927 aa
MSSQTLLLVDGSSYLYRAYHAMAPLTAPDGTPTGALYGVLNMLRRLRADNQHDHCCCVFD
AKGKNFRHDMFPDYKATRPPMPDDLRPQAEMLPELVRLMGWPVLVVPDVEADDVIGTLAK
AGEEAGWNVVISTGDKDMAQLVSERITLVNTMKNETLDIEGVKHKFGVRPDQIIDYLALM
GDKVDNVPGVEKCGPKTAVKWLESYDSLQGVMAHADEIKGKVGENLQAALPRLPLSYELV
TIKTDVDLHGELPEGLHSLHRQSPKWSQLAVEFKRLNFRTWLKEAETRISEGNGEDLFAT
LDIGEQAALAAERPLEIKNTLPEAPQTLDYQAITTEAAFAELLARLDMAEAIGLDTETTS
LDAMQARLVGISIAFAPGVAVYIPLGHTPTAAPEQLDLHDVLGRLKPYFESGRLKKIGQN
LKYDEHVLYNYGIKLNGIAGDAMLASYIVESHLGHGLDELAERWLGLPTVTYESLCGKGA
KQISFADVAVEQATEYAAQDADFALRIEGRLKAQMDAKQLEMYEKLELPVAEVLFIMERN
GVLIDKNELARQSHELGTELVRLEQQAYEIAGQPFNLNSPKQLQEILFGKMGIPTKGLKK
TASGGVSTNEAVLEQLAPDYPLPSIILQNRSLAKLKSTYTDKLPEMINPATGRVHTTYAQ
AVAITGRLASNNPNLQNIPIRTEQGRRVRRAFVAPEGSKIVSADYSQIELRIMAHLSGDK
TLLEAFQNGEDVHRRTAAEVFGIAPENVGSEQRRYAKTINFGLIYGMGQYGLAKSLGIDA
LSAKSFIDRYFARYPGVADYMQRTKELAAAQGYVETVLGRRLYLPGIHSKNGNERAGAER
AAINAPMQGTASDLIKRAMIDVCHWLASDGLESKLIMQVHDELVLEVPDSELDLVRAKLP
EIMQQAGEMDVPLLAEVGVGDDWEEAH
NT seq 2784 nt   +upstreamnt  +downstreamnt
atgtcttcccaaaccctgcttttagtcgacggctcatcttatctctaccgcgcttatcac
gccatggcgccgctcaccgcgcccgacggcacgcccacgggcgcgctttacggcgtattg
aacatgctgcgccgcctgcgtgcagacaaccagcacgaccattgctgctgcgtgtttgat
gccaaaggcaaaaatttccgccacgatatgtttcctgactacaaagccacgcgcccgccc
atgccggatgatttgcgcccgcaggccgagatgttgcccgagttggtgcggctgatgggc
tggccggtgctggtggtgcccgatgtggaagccgatgatgtgattggcacgctggccaaa
gccggtgaagaagcgggctggaatgtggtgatttccaccggcgataaagacatggcgcaa
ttggtgagcgaacgcatcaccctcgtcaacaccatgaaaaatgaaacgctcgatattgaa
ggcgtgaaacacaaattcggcgtgcgccccgaccaaatcatcgattatctggcgctgatg
ggcgataaagtcgacaacgtgccgggcgtggaaaaatgcggccccaaaacggcggtgaaa
tggctggaaagttacgactcgctgcaaggcgtgatggcgcatgccgatgaaatcaaaggc
aaagtgggtgaaaatctgcaagccgcgctgccgcgcctgccgctctcttatgaattggtt
accatcaaaaccgatgtcgatttgcacggcgaattgcctgaaggcctgcacagcctgcac
cgccaaagcccaaaatggagccaattggcggtggaattcaagcgcctgaatttccgcacc
tggctcaaagaagccgaaacccgcatcagcgaaggcaacggcgaagatttgtttgccacg
ctcgatatcggcgaacaagctgcgctggcagccgagcggccgcttgaaataaaaaatacg
ctgcctgaagccccgcaaacgctcgattatcaagccatcaccaccgaagccgcctttgcc
gaattgctggcgcggctcgatatggccgaagcaatcggcctcgacaccgaaaccaccagt
ctcgacgccatgcaggcgcggctggtgggcatcagcattgcctttgcgccgggcgttgcc
gtgtatattccgctcggccacacgcccaccgccgcgcccgaacaattggatttgcacgat
gtattaggccgtctgaaaccttatttcgaatcaggccgtctgaaaaaaatcggccaaaat
ctgaaatacgacgaacatgtgttgtacaactacggcatcaaattaaacggcattgccggc
gatgccatgctcgcttcctatattgtggaaagccacttggggcatggtttggacgaattg
gccgaacgctggctcggcctgcccaccgtcacctatgagagcctgtgcggcaaaggcgcc
aagcagatttcgtttgccgatgtggccgttgagcaagccaccgaatatgccgcgcaagac
gccgatttcgccttgcgcatcgaaggccgtctgaaagcgcaaatggatgccaagcagctt
gaaatgtatgaaaaactcgagctgcccgtggccgaagtgctgtttatcatggagcgcaac
ggcgtgctcatcgacaaaaacgagcttgcccgccaaagccacgaattgggcaccgaattg
gtgcggcttgaacagcaggcctacgaaattgccggccaacccttcaacctcaattcgccc
aaacaattgcaggaaattttgttcggcaaaatgggcattcccaccaaaggcctgaaaaaa
accgccagcggcggcgtgtccaccaacgaagccgtgctcgagcagctcgcacccgactac
cccttgcccagcatcattttgcaaaaccgcagcctcgccaagctcaaatccacctacacc
gacaagctacctgaaatgatcaaccccgccaccggccgcgtgcacaccacttatgcccaa
gccgtggccatcaccggccggctcgccagcaacaaccccaacctgcaaaacatccccatc
cgcaccgaacaaggccgccgcgtgcgccgcgcctttgttgcgcccgagggcagcaaaatc
gtgtcggccgactattcgcaaatcgaattgcgcatcatggcgcacttgagcggcgacaaa
accctgctcgaagcctttcaaaacggcgaagacgtgcaccgccgcaccgccgccgaagtg
ttcggcatcgcccccgaaaacgtgggcagcgagcagcgccgctacgccaaaaccatcaac
ttcggcctcatttacggcatgggccaatacggcctcgccaaatcgctcggcatcgacgcc
ctctccgccaaaagctttatcgaccgctacttcgcccgctaccccggcgtggccgactac
atgcagcgcaccaaagagctcgccgccgcgcaaggctacgtcgaaaccgtgctcggccgc
cgcctgtatctgcccggcatccacagcaaaaacggtaacgagcgcgccggtgccgaacgc
gccgccatcaacgcccccatgcagggcaccgcttccgatttaatcaaacgcgccatgata
gacgtgtgccattggctcgcttcagacggccttgagagcaaactgattatgcaggtgcac
gatgaattggtgctggaagtgccggatagcgagctggatttggtgagggcgaaactgccc
gagattatgcagcaagcgggggaaatggatgtgccgctgttggcggaagtgggtgtgggg
gatgattgggaagaggcgcattaa

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