Uruburuella suis: LVJ78_00340
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Entry
LVJ78_00340 CDS
T08067
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
usu
Uruburuella suis
Pathway
usu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ78_00340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
usu03019
]
LVJ78_00340 (recQ)
03400 DNA repair and recombination proteins [BR:
usu03400
]
LVJ78_00340 (recQ)
Enzymes [BR:
usu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVJ78_00340 (recQ)
Messenger RNA biogenesis [BR:
usu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVJ78_00340 (recQ)
DNA repair and recombination proteins [BR:
usu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVJ78_00340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOO79520
UniProt:
A0AAE9GT93
LinkDB
All DBs
Position
complement(74268..76571)
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AA seq
767 aa
AA seq
DB search
MTNPPAARQILHEVFGYPEFRGRQERIVNTLAGGESLLVLMPTGGGKSLCYQIPALMREG
VAVVVSPLIALMNDQVAGLHAAGVAAACVHSGTHPDEVRQIAEDIARGRLKLLYVAPERL
VNERFLRFLDQNTISLFAIDEAHCVSQWGHDFRPEYQQLGLLAERYPDIPRIALTATADA
ETRADIKHYLKLEQAPEFIDSFDRPNIYYQVIEKNNGKKQLLDFIQKQMTGQSGIVYCLS
RKKVEDVAAFLCGHGLDAIAYHAGLSMETREANQRRFTRDDGVIVVATVAFGMGIDKPDV
RFVAHLDMPQSVEHFYQESGRAGRDGLPAASWLCYGLNDWVILRERIQQGASEEMQKNIE
LQKLDAMLGVCETADCRRVMLLQHFGETSAPCGHCDNCLHPPVRFDGTVLVQKLLSCVYR
VGQRFAAGYVINVLRGKGDDWMARNGHDKLSTFGIGDALGDKEWRGVIRQCIGLGLLNVN
VTLHQSLQLTEAAKAVLKGSQAVWLRPLKREKAATQKPKEEWLRTEREERLWQALRSWRM
EKARAEEVPAYVICGDKTLRDVVEKMPQTPADLHHIYGLGEAKINKFGQEILAVCQGERP
SEAAPAGAEPSSERARGLEAALSAWREQQAQSEGTTTGKIFSDDSLRDMVENTPATELDV
QSIYGLGDVRIQKYGAGILAVCAPFSDGLSPAAEQRRQRMRALLQWCGQTAAAENLEDYQ
VLSKITLRAIAAKQPQTLAGLRDIHGMDEEKTAKYGEALLAVCREAV
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccgcccgccgcccggcagattttgcacgaagtgttcggttatcccgaattc
cgcggccggcaggagcgcattgtcaacacgctggccgggggtgaaagcctgctggtgctg
atgcccaccggcggcggcaaaagcctctgctatcaaattcccgcgttgatgcgcgaaggt
gtggcggtggtggtgtcgccgctgattgccttaatgaacgatcaagtagccggcctgcat
gccgccggcgtggctgcggcttgtgtgcacagcggcacacatcccgatgaagtgcgccaa
atcgccgaagatattgcccgaggccgtctgaaacttttatatgtggcgcccgagcggctg
gtaaacgagcgctttttgcgctttctcgatcaaaacaccatcagcctgtttgccattgat
gaagcgcattgcgtgagccaatgggggcacgatttccgccccgaataccaacaattgggg
cttttggccgagcgctatcccgatattccgcgcatcgcgctcaccgccacggccgacgcc
gaaacccgcgccgacatcaagcattatctcaagctggagcaagcgcccgaatttatcgac
agcttcgaccgcccgaatatttattaccaagtgattgaaaaaaacaacggcaaaaagcag
ctgctggattttattcaaaagcaaatgaccggccaaagcggcattgtgtattgcttgagc
cgcaaaaaagtggaagatgtggctgcctttttatgcggacacggcctcgatgccattgct
tatcacgccggcttaagcatggaaacgcgcgaagccaaccaacgccgcttcacccgcgac
gacggcgtgattgtggtggccacggtggctttcggcatgggcatcgacaagcccgatgtg
cgctttgtggcgcatctggacatgccgcaaagcgtggagcatttctatcaggaatccggc
cgcgccggccgcgacggcttgcctgccgccagctggctctgctacgggctcaatgactgg
gtgattttgcgcgaacgcattcagcaaggcgccagcgaagagatgcagaaaaacatcgaa
ttgcaaaagctcgatgccatgctcggcgtgtgcgaaaccgccgactgccgccgcgtgatg
ctgttgcagcatttcggcgaaacgagcgcgccctgcggccattgcgacaactgcctgcac
ccgcccgtgcgctttgacggcaccgtgttggtgcaaaaattattaagctgcgtgtatcgc
gtcggccagcgctttgccgcgggctatgtgattaacgtgttgcgcggcaagggtgacgat
tggatggcgcgcaacggccacgataaattgtccactttcggcatcggcgatgcgcttggc
gacaaagaatggcgcggcgttatccgccaatgcatcggcttggggcttttgaatgtaaac
gtcacgctgcaccaatcacttcagctcaccgaagcggccaaagccgtattgaaaggcagc
caagccgtgtggctgcgcccgctcaagcgcgaaaaagccgccacccaaaagccgaaagaa
gaatggctgcgcaccgagcgcgaagagcggctgtggcaggctttgcgcagctggcgcatg
gaaaaagcccgcgccgaagaagtgcccgcctatgtgatttgcggcgacaaaaccctgcgc
gatgtggtggaaaaaatgccgcaaacccccgccgatctgcaccacatctacggcttgggc
gaagccaaaatcaataaattcggccaagaaatattggccgtctgccaaggggagcggccg
tctgaagccgcgcctgccggtgcagagccgagtagcgaacgcgcacgcggtttagaggcc
gcactaagcgcttggcgcgaacagcaggcacaaagcgaaggcacaaccaccggcaaaatt
ttcagcgacgacagcctgcgcgatatggtggaaaacacccccgccaccgagctcgatgtg
caaagcatttacggcttgggcgacgtgcgcattcaaaaatacggtgcaggcattcttgcc
gtgtgcgccccgttttcagacggcctcagccctgccgccgaacagcgccgccaacgaatg
cgcgccttgttgcaatggtgcggccaaaccgccgctgccgaaaatctcgaagattaccaa
gtgctcagcaaaatcaccttgcgcgccattgccgccaaacagccgcaaaccttagccggt
ctgcgcgacatccacggcatggatgaggaaaaaaccgcgaaatacggagaagcgctgttg
gcggtatgcagagaggccgtctga
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