Uruburuella suis: LVJ78_00705
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Entry
LVJ78_00705 CDS
T08067
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
usu
Uruburuella suis
Pathway
usu03030
DNA replication
usu03430
Mismatch repair
usu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ78_00705 (dnaE)
03430 Mismatch repair
LVJ78_00705 (dnaE)
03440 Homologous recombination
LVJ78_00705 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
usu03032
]
LVJ78_00705 (dnaE)
03400 DNA repair and recombination proteins [BR:
usu03400
]
LVJ78_00705 (dnaE)
Enzymes [BR:
usu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ78_00705 (dnaE)
DNA replication proteins [BR:
usu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ78_00705 (dnaE)
DNA repair and recombination proteins [BR:
usu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ78_00705 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
UOO79591
UniProt:
A0AAE9KGU8
LinkDB
All DBs
Position
complement(146336..149764)
Genome browser
AA seq
1142 aa
AA seq
DB search
MTDPVYIPLRLHTEFSITDGTVRIKQAVKQAAAYGLPALGVSDLMNTFGLVKFYKACRSA
GIKPIASADVWIENPEAPEKPFRAMLMVRNDAGYLRLSELLTAAYVGKDRNIDHAELRQS
WLAEGDNSGLICLSGAHYGEVGANLLNGHEEAAQAAAQKYAAWFPDAFYLELQRLPERPQ
WETSVAGSLQIAAALDLPVVATHPTQFSNPDDFEAHEARVCIAGGWVLADKKRPHEFAPS
QFFVSPEVMAERFADLPEALQNSVEIAKRCNIHITLGKNFLPQFPTPDGMSLDDYLSLLS
NQGLQERMVQLYPDEAERAAQMPEYQARLDFELKIIIQMGFPGYFLIVQDFINWAKNNGC
PVGPGRGSGAGSLVAYALNITDLDPLEYALLFERFLNPERVSMPDFDIDFCQSNRGRVIE
YVREKYGADAVSQIVTFGTLSSKAVIRDVGRVLELPFGLCDKLSKLIPLEANRPVSLEKA
MEMEPEIQTLINNEDAGQLIDLAKKLEDLTRGLGMHAGGVLIAPGKISDFSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQNFIAQTTGEKVDVSQIPLDDAAAYKI
FSTANTTAVFQFESTGMKKMLQKAKPTQFEEIIAFVSLYRPGPMDLIPDFIDRMHGARFE
YLHPLLSDVLAPTYGIMVYQEQVMQAAQVIGGYTLGGADLLRRAMGKKKVEEMVKQRATF
VAGAAEKGIAQQKADEIFDYMEKFAGYGFNKSHAAAYSLVAYQTAWLKAHYPAEFMAATM
SSELDNTDQLKLFYDDARANGLEFLPPDINQSDYRFTPNNQRQIRYALGAVKGTGEAAVE
AIVAARQSGPFQDLLDFCERVGKAHINKRTVESLIRGGAFDSIHPNRAMLLANIDLAMSN
AEQKAANANQGGLFDMMEDAIEPVQLADAPEWSESEKLAEEKQVLGFYFSGHPFGPFAAE
VRQFAPLRLNKLKPQEHVRVAGFVTAVRTMMGRRGKIAFATVEDQNGQAEVMVSGQVLEE
AAGRLKADRVLIMECKISRDDYSGGDALRIMANSVLDLSTARERFARSVRLSLAPHHDIR
ALAELIESSRQEGSRIPLQLSYRNAAAGGDLRPGARWSISPSADLFHRLEALLGARSIQV
GW
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatcctgtttacattcccctgcgcctgcacaccgaattttccatcaccgacggc
accgtgcgcatcaagcaagcggtgaagcaggctgccgcttacggcctgccggcgctgggc
gtgagcgatttgatgaacactttcggcttggtgaaattctacaaagcctgccgcagcgcc
ggcatcaagccgattgcctcggccgatgtgtggattgaaaaccccgaagcgcccgaaaag
ccttttcgcgcgatgctgatggtgagaaacgatgcgggctatctgcgcttaagcgaattg
ctcaccgccgcttatgtgggcaaagaccgcaatatcgaccatgccgagctgcgccaaagc
tggctggccgagggcgacaacagcggcctgatttgcctctcgggcgcgcattatggcgaa
gtgggcgccaatctgctcaacggccacgaagaagccgcccaagccgccgcgcaaaaatac
gcggcttggtttcccgatgcgttttacttggaattgcagcggctgcccgagcggccgcaa
tgggaaacttcggtggccggcagcctgcaaattgccgccgcgctcgatttgccggtggtg
gccacgcatccgacgcagttttccaaccccgatgatttcgaagcgcatgaggcgcgggtg
tgcattgccggcggctgggtgttggcggataaaaagcgcccgcacgaatttgcgccgagc
cagtttttcgtgtcgcccgaggtgatggccgagcgctttgccgatttgcccgaagcgctg
caaaattcggtggaaatcgccaagcgctgcaatatccacatcacgctgggcaaaaacttt
ctgccgcaatttcccacgcccgacggcatgtcgctcgatgattatctgagcctgctttcc
aatcaaggcctgcaagagcgcatggtgcaactttaccccgatgaagccgagcgcgcggcg
cagatgcccgaatatcaggcgcggctggatttcgagctgaaaatcatcattcaaatgggc
tttccgggctatttcctcatcgtgcaagatttcatcaactgggcgaaaaacaacggctgc
ccggtggggccggggcgcggctcgggcgcaggctcgcttgtggcttatgcgctcaacatt
accgatctcgacccgctcgaatatgcgctgctgtttgaacgctttttgaatcccgagcgc
gtgtccatgcccgacttcgatatcgatttctgccagagcaaccgcggccgcgtaattgaa
tatgtgcgcgagaaatacggcgccgatgcggtgagccagattgtgactttcggcaccttg
tcgtccaaagccgtgattcgcgatgtggggcgcgtgctcgagctgccgtttggtttgtgc
gacaaattatccaagctgattccgctcgaggccaaccgcccggtgagccttgaaaaagca
atggaaatggagcccgaaatccaaacgctgattaacaacgaagatgccggccaattaatc
gatttggccaaaaagctcgaagacctcacccgcggcttgggcatgcacgcgggcggcgtg
ctgattgcgccgggcaagatttccgatttcagccccgtgtatcaggccgatgaatcggcc
tcgccggtgtcgatgtatgacaaaggcgatgtggaagacgtgggcttggtgaaattcgac
tttttgggcttgcgcaacctcaccattatcgaaatggcgcaaaactttatcgcccaaacc
accggcgaaaaagtggacgtgagccagattccgcttgatgatgcggccgcctacaaaatt
ttttccaccgccaacaccactgcggtgtttcagtttgaatccaccggcatgaaaaaaatg
ctgcaaaaggccaagcccacgcagtttgaagagattattgcctttgtgtcgctctaccgc
ccggggccgatggatttgatacccgattttatcgaccgcatgcacggcgcgcgctttgaa
tacctgcacccgcttttgagcgatgtgctcgcgcccacttacggcattatggtgtatcag
gagcaggtgatgcaggcggcgcaggtgatcggcggctacacattgggcggcgcggatttg
ctgcgccgcgccatgggcaagaaaaaagtggaagaaatggtgaagcagcgcgccactttt
gtggccggtgcggctgaaaaaggcattgcccagcaaaaagccgacgaaattttcgactat
atggaaaaattcgccggctacggcttcaacaaatcacacgccgccgcctattcgctggtg
gcctaccaaaccgcctggctcaaagcgcattatccggccgaatttatggccgccaccatg
tcgagcgaattggacaacaccgaccaactcaagcttttttacgacgacgcgcgcgccaac
ggcctcgaatttctgccgcccgacatcaaccaatccgattaccgcttcacccccaacaac
caacgccaaatccgctatgccctcggcgcggtgaaaggcacgggcgaagcggcggtggaa
gcgattgtggccgcacggcaaagcgggccgtttcaagatttgctcgacttttgcgaacgc
gtaggcaaagcgcacatcaacaaacgcaccgtggaatcgctgatacgcggcggcgcgttt
gacagcatccaccccaatcgcgccatgcttctggccaacatcgatttggccatgagcaac
gccgaacaaaaagcggccaatgccaaccaaggcggcttgtttgacatgatggaagacgcc
atcgagccggtgcagcttgccgatgcgcccgaatggagcgaatcggaaaagctcgccgaa
gaaaaacaagtgctcggcttttacttttccggccacccttttggcccgtttgccgccgaa
gtgcgccaatttgccccgctgcgcctcaacaagctcaagccgcaggagcatgtgcgcgtg
gccggcttcgttaccgccgtgcgcaccatgatgggacggcgcggcaaaatcgcctttgcc
accgtggaagaccaaaacggccaagccgaagtgatggtgagcgggcaagtgctcgaagaa
gcggcaggccgtctgaaagccgaccgcgtgctgattatggaatgcaaaatcagccgcgac
gattacagcggcggcgatgcgctgcgcatcatggccaacagcgtgctcgatctctccacc
gcgcgcgaacgcttcgcccgcagcgtgcgcctcagcttggcaccgcatcacgacatccgc
gcattggccgagctgattgaaagcagccgccaagaaggcagccgcatcccgctgcaattg
agctatcgcaacgcagcggccggcggcgatttgcgccccggcgcccgctggagcatcagc
cccagcgccgatttgtttcaccgcctcgaagcccttttgggcgcgcgctcgattcaagtg
ggctggtaa
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