Uruburuella suis: LVJ78_00715
Help
Entry
LVJ78_00715 CDS
T08067
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
usu
Uruburuella suis
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
usu03016
]
LVJ78_00715
Enzymes [BR:
usu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LVJ78_00715
Transfer RNA biogenesis [BR:
usu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ78_00715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UOO79593
UniProt:
A0AAE9KIU7
LinkDB
All DBs
Position
152302..154167
Genome browser
AA seq
621 aa
AA seq
DB search
MNIFYEESGQFKVAAVVQKNDATYQVDTQHGKRTKVKANNVFAEFEMPMADFLEKAQAEA
AEIDTDLLWEVCGEAEFSATAIAEDYFGHAPSQIELAATLMALYGAPMYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIEAWAAELQQGGLPAEIGADLKTILHAPDKQTLTYKAF
TKAADAMKLSPLALAQQSGGVASIPQYLRDGFEMKYFPRGIAFADLPVPALADLPRAEVE
AFSIDDDATTEVDDALSLTDLAGGGKRVGIHIAAPALAIAPGSDMEKTIAERQSTVYFPG
DKITMLPENWIAAFSLDAGGYRPAVSIYFDVDADFNVSAPGCKIEAVNIVENLRIQAIEP
HFNAQSGLDAEGAALFAHHRDLIWFYQLAIARQKARGKYEPERAAQYDYSIELASDGLVS
VARRERGSPIDTLVSEMMILANSTWAQMLDQAGLPGLFRVQPAGKVRMSTQSEPHIGMGV
QHYGWFTSPLRRAADYINQKQIISLIDPQAAPLYQKNDADLFAALRDFDTAYSAYADFQR
QMEAYWSLVYLQQQGIKELTATLLKDDLVRIDGLPMVARASGIPFDALPRSQMKVAVAEV
DADKQFIALNYLKAVAPPNAA
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttatgaagaatccggccaattcaaagtggccgccgtggtgcagaaaaac
gatgccacttatcaggtcgacacccaacacggcaagcgcaccaaggtgaaagccaataat
gtatttgccgaattcgagatgccgatggctgattttctggaaaaagcccaagccgaagcg
gccgaaatcgacaccgatttgctgtgggaagtgtgcggcgaagccgaattttccgccacc
gccattgcggaagactatttcggccatgcgccgagccaaatcgagctggccgccacgctg
atggcgctttatggcgcgccgatgtatttctataaaaaagccaaaggcgtgtttaaagcc
gcgccggaagaaacgctcaagcaggctttggccgccatcgagcgcaaaaagcagcaagat
gcgcaaatcgaagcgtgggcggccgagcttcagcaaggcggcctgcccgccgaaatcggc
gccgatttgaaaaccattctgcacgcgcccgacaaacaaacgctcacttataaagccttc
accaaagcggccgatgccatgaagctctcgcccctagctttggcgcagcaaagcggcggc
gtggcttcgattccgcaatatttgcgcgacggcttcgaaatgaaatattttccgcgcggc
attgcctttgccgatttgcccgtgcccgctttggctgatttgccccgcgccgaagtggaa
gccttctcaattgacgatgacgccaccaccgaagtggacgatgccttgagcctcaccgat
ttggccggcggcggcaaacgcgtgggcatacacattgccgcacccgcgctggccatcgcg
cccggcagcgacatggaaaaaaccatcgctgagcgccaaagcaccgtgtatttccccggc
gacaaaatcaccatgctgcccgagaattggatcgccgccttcagcctcgatgccggcggc
taccgccccgctgtgagcatttatttcgatgtggatgccgatttcaacgtcagcgcgccg
gggtgcaaaatcgaagcggtaaacatcgtggaaaacctgcgcattcaggccatcgagccg
catttcaatgcccaaagcggcctagatgccgagggcgcagccctgtttgcccaccaccgc
gatttgatttggttttaccaattggccatcgcccgccaaaaagcgcgcggcaaatacgag
cctgagcgcgccgcacaatatgattacagcatcgaattggcttcagacggcctggtttcc
gtggcccggcgcgagcgcggttcgcccatcgacaccttggtgagcgaaatgatgattctg
gccaacagcacttgggcccaaatgctcgaccaagccggtctgcccggccttttccgcgtg
cagcccgcgggcaaagtgcgcatgagcacccaatccgagccgcatatcggcatgggcgtg
cagcattacggctggtttacctcgccgctgcgccgcgccgccgactacatcaaccaaaag
cagatcatcagcctgattgacccgcaagccgcgccgctttatcagaaaaacgatgccgat
ttattcgccgcgctgcgcgatttcgacaccgcctattcggcctatgccgatttccagcgc
caaatggaagcctattggagcttggtttacttgcagcagcaaggcattaaagaattaacc
gccacgcttttgaaagacgatttggtgcgcatcgacggcctgcccatggtggcgcgcgcc
agcggcattccgtttgacgctctgccgcgctcgcaaatgaaagtggccgtggccgaagtg
gatgccgacaagcagtttatcgcactcaattatctgaaagccgtggcaccgccgaatgcc
gcgtga
DBGET
integrated database retrieval system
