Uruburuella suis: LVJ78_02455
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Entry
LVJ78_02455 CDS
T08067
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
usu
Uruburuella suis
Pathway
usu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ78_02455 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
usu03019
]
LVJ78_02455 (pnp)
03016 Transfer RNA biogenesis [BR:
usu03016
]
LVJ78_02455 (pnp)
Enzymes [BR:
usu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
LVJ78_02455 (pnp)
Messenger RNA biogenesis [BR:
usu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LVJ78_02455 (pnp)
Transfer RNA biogenesis [BR:
usu03016
]
Prokaryotic type
tRNA degradation factors
LVJ78_02455 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
KH_2
KH_PNO1_2nd
KH-I_KHDC4-BBP
DUF5813
Motif
Other DBs
NCBI-ProteinID:
UOO79900
UniProt:
A0AAE9GY42
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All DBs
Position
complement(547456..549582)
Genome browser
AA seq
708 aa
AA seq
DB search
MFNKHIKTFQYGNQTVSIETGEIARQASASVKVSMGDTVVLVAVTAAKTVKAGQDFFPLT
VDYLERTYAAGKIPGGFFKREGKQSEKEILTSRLIDRPIRPLFPEGFYHDIQIVAMVVSV
DPEIDSDIPAMIGASAALVLSGVPFAGPIGAARVGYANGQYLLNPTKTELETSQLDLVVA
GTQKAVLMVESEAQQLPESVMLGAVVFGHEQLQAVIGAINELADEVNPEVWAWQPAETDA
ALEAKIREIAADAIAEAFKIRQKQARTTKLDEAWAAVKEALITEDTDTLAANQIKGIFKQ
LEADVVRGQILDGQPRIDGRDTRTVRPIDIQTGVLPRTHGSALFTRGETQALAVATLGTS
RDEQIIDALSGEYTDRFMLHYNFPPYSTGEVGRMGAPKRREIGHGRLAKRALLAVLPAPE
DFSYTMRVVSEITESNGSSSMASVCGGCLSLLSAGVPLKAHVAGIAMGLILEGNKFAVLT
DILGDEDHLGDMDFKVAGTTDGVTALQMDIKIQGITKEIMQIALEQAKEARFHILGQMQA
AVEGPQELSAHAPRLYTMKISQDKIRDVIGKGGETIRALTAETGTEINIAEDGTITIAAT
SEEAGNAAKKRIEQITAEVEVGKVYEGTVLKILDNNVGAIVSVMPGKDGLVHISQIAHER
VNNVGDYLKVGQTVNVKALEVDDRGRVRLSIKALLEAPAREPRKEQAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaaacatatcaaaaccttccaatacggcaaccaaaccgtcagcatcgaaacc
ggcgaaatcgcgcgccaggcttccgcttcggtaaaagtatccatgggcgacaccgtggtg
ctggtggccgttaccgccgccaaaaccgtgaaagccggccaagattttttcccgctcacc
gtggattacctcgagcgcacctatgcagccggcaaaatccccggcggcttcttcaagcgc
gaaggcaagcagagtgaaaaagaaatcctcaccagccgcctgatcgaccgccccatccgc
ccgctcttccccgaaggcttctatcacgacatccaaatcgtagcgatggtggtatcggtt
gatcccgaaatcgattccgacattcccgccatgatcggcgcatctgccgcgctggtgctc
agcggcgtaccttttgccggccccatcggcgccgcacgcgtgggctatgccaacggccaa
tacctgctcaacccgaccaaaaccgagctggaaacttcacagctggatttggtggtggcc
ggcacccaaaaagccgtgctgatggtggaatcggaagcacaacaattgcccgaaagcgtg
atgctgggcgcggtggtgttcggccacgagcaattgcaggcagtgattggcgccattaat
gaattggccgatgaagtcaaccccgaagtgtgggcatggcagccggccgaaaccgatgcc
gcattagaagccaaaatccgcgaaatcgccgccgatgcgattgccgaagcgtttaaaatc
cgccaaaaacaagcccgcaccaccaagctcgatgaagcctgggcggcagtaaaagaagcg
ctgatcacggaagacaccgacaccttggccgccaaccaaatcaaaggcatcttcaagcag
cttgaagccgacgtggtgcgcggccagattctcgacggccaaccgcgtatcgacggccgc
gacacccgcaccgtgcgccccatcgacatccaaaccggtgtgctgccgcgcacccacggc
tcggctttgttcacccgcggcgaaacccaagccttggccgtggccactttgggcacttcg
cgcgacgagcaaatcatcgatgccttgagcggcgaatacaccgaccgctttatgctgcat
tataatttcccgccctattccaccggcgaagtcggccgcatgggcgcgcccaaacgccgc
gaaatcggccacggccgcctggccaaacgcgcccttttggccgtgttgcccgcgccggaa
gatttcagctacaccatgcgcgtggtttccgaaatcaccgaatccaacggctcttcttca
atggcttccgtgtgcggcggctgcctgagcctcttgtcggccggcgtgccgctcaaagcc
cacgtggccggcatcgccatgggcttgattttagaaggcaacaaatttgccgtgctcacc
gatattctgggcgatgaagaccacctcggcgacatggatttcaaagtggccggcaccacc
gatggtgttaccgcgctgcaaatggacatcaaaatccaaggcatcaccaaagaaatcatg
cagattgccttggagcaggccaaagaagcgcgtttccacattctgggccaaatgcaagct
gcggtagaaggcccgcaagagctctctgcccacgcaccgcgcctctacaccatgaaaatc
agccaagataaaatccgcgacgtaatcggcaaaggcggcgaaaccatccgcgcactcacc
gctgaaaccggcaccgaaatcaacatcgcggaagacggcaccatcaccatcgccgccacc
agcgaagaagccggcaatgccgccaaaaaacgcatcgagcaaatcaccgccgaagtggaa
gtgggcaaagtgtatgaaggcaccgtgttgaaaattctcgacaacaacgtcggcgcaatt
gtgtcggtgatgccgggcaaagacggcttggtgcacatcagccaaatcgcgcacgaacgc
gtcaacaatgtcggcgattacctgaaagtgggtcaaacggtcaacgtgaaagcgctggaa
gtagacgaccgcggccgcgtgcgcctctccatcaaagccctgctcgaagcccccgcccgc
gagccgcgcaaagagcaagccgaataa
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