Uruburuella suis: LVJ78_05445
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Entry
LVJ78_05445 CDS
T08067
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
usu
Uruburuella suis
Pathway
usu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ78_05445 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
usu03400
]
LVJ78_05445 (recD)
Enzymes [BR:
usu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ78_05445 (recD)
DNA repair and recombination proteins [BR:
usu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ78_05445 (recD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
NAT10_TcmA_helicase
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
AAA_28
AAA
T2SSE
SRP54
AAA_16
UvrD_C
DEAD
AAA_5
NTPase_1
TrwB_AAD_bind
AAA_29
DUF8575
Mg_chelatase
ATPase
CbiA
Motif
Other DBs
NCBI-ProteinID:
UOO80442
UniProt:
A0AAE9GY35
LinkDB
All DBs
Position
1221586..1223325
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AA seq
579 aa
AA seq
DB search
MTVHSDADLNQAAADAACSFLQHYAPAAAPLAVPYVPRLFAALADGHSFIWLSAAEAAAL
AEAAPLVSRGGNTPLVLLERRLFLGRMWQLERDLAAQIARLAQAKLPAPDWLQAGQDLHD
WFAQAGSEGQRDAAALALLQAFMLISGGPGTGKTTTVAKLLALLCNQSAELPRIALAAPT
GKAAAHMARALHRALGTFDAPAAVKQHLLQLQGQTVHRLLKLRAPQMRPQFNEEQPLPLD
ILIIDEASMLDIALLLQLLRAVPDGCRVVLLGDENQLPSVGAGAVLAALAQPTLLSENAA
AQLQAMLPQHGFQTALSPPPMSQNVARLVVSHRFDDQSGIGSLARAVVAEDAALAWAQFA
RFPEALGVWQGSRREQAEALYALHADYWQAVAGGDVAAAFAHQADAVVLAAWRDDAAAFN
EAYRQCLQRHGRARADVPWFAGQMVMIERNDYALNVFNGDIGLVLPDKENAGALAAWFAA
AEGYRSIPLSRLSAHSPAFAITVHKSQGSEYREVWLLPPSVEMPPESGAGLNKALLYTAI
TRARERFVFCGSQAVFQTACGLNAQRRSALREMMMQRFE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgactgttcattcagatgctgatttaaaccaggccgccgccgatgcggcctgctcgttt
ttgcaacactatgcgcccgcagcggcgccactggccgtgccttatgtgccgcgcctgttt
gccgctttggcggacgggcattcgtttatttggctgagcgcggcagaagcagcggctttg
gccgaagcggcgccgttggtgagccgtggcggcaacacgccgctggtgctgctggagcgg
cgtttgtttttggggcgcatgtggcagctcgagcgtgatttggccgcccaaatcgcgcgg
ttggcgcaagctaagctgccggcgcccgattggttgcaggcggggcaggatttgcacgat
tggtttgcacaggcgggcagcgaagggcagagggatgcggcggcgctcgcgctgctgcaa
gcgtttatgctcatcagcggcggccccggcaccggcaaaaccaccaccgtggccaagctt
ttggcgctgctgtgcaaccaaagcgccgaactgccgcgcatcgcgctggccgcgcccacc
ggcaaagcggcggcgcatatggcgcgcgcgctgcatcgggcgctgggcacttttgatgca
cccgctgcggtgaagcagcatttgttgcagctgcaaggccaaaccgtgcaccggctctta
aagttgcgtgcgccgcaaatgcgcccgcaatttaatgaagagcagccgctgcctttggat
attctgattattgatgaagcttcgatgctggatattgccttgctgttgcagcttttgcgt
gccgtgcccgatggctgccgcgtggtattgctcggtgatgaaaaccagctgccttcggtg
ggcgcaggtgcggtgttggcggcgttggcgcagcccactttattgagtgaaaacgcggca
gcgcaattgcaggctatgttgccgcaacacggttttcagacggccttatcgccgccgcct
atgtcgcaaaacgtggcgcgccttgtggtgagccaccgctttgatgatcaaagcggtata
ggctcgctggcgcgcgcggtggtggcggaagatgcggcgctggcttgggcgcagtttgcg
cgctttcccgaagcgctgggcgtgtggcagggcagccgccgcgagcaggccgaggctttg
tatgctttgcacgcggattattggcaggcggtggccggcggcgatgtggcagcggctttt
gcccatcaggccgatgcggtggtgctggcggcttggcgcgatgatgcggcggcgtttaac
gaggcctatcggcaatgcctgcaacgccacggccgcgcccgtgccgatgtgccgtggttt
gccgggcagatggtgatgatagagcgcaacgattatgcgctcaatgtgttcaacggcgac
atcggcttggtgctaccggataaagagaatgcgggcgcacttgccgcctggtttgccgca
gccgagggctaccgcagcattccgctgagccgcttgagcgcacacagcccggcttttgcg
attaccgtgcacaaaagccaaggctcggaataccgtgaagtgtggctgctgccgccgtcg
gtggaaatgccgcccgaaagcggcgcaggcttgaacaaggcgctgctctacaccgccatc
acccgcgcgcgcgaacgctttgtgttttgcggcagccaagccgtgtttcagacggcctgc
ggcttgaatgcgcaacggcgcagcgctttgcgcgaaatgatgatgcagcgttttgaatga
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