Uruburuella suis: LVJ78_06015
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Entry
LVJ78_06015 CDS
T08067
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
usu
Uruburuella suis
Pathway
usu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ78_06015 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
usu03400
]
LVJ78_06015 (recB)
Enzymes [BR:
usu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ78_06015 (recB)
DNA repair and recombination proteins [BR:
usu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ78_06015 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
ResIII
DUF3799
Motif
Other DBs
NCBI-ProteinID:
UOO80544
UniProt:
A0AAE9H2C4
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All DBs
Position
1344202..1347840
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AA seq
1212 aa
AA seq
DB search
MTAQPFHPLDIPIHGTNLIEASAGTGKTWGIAALFTRLIVLEKMPVEQILVVTFTKAATA
ELKTRLRARLDEALQTLEILGSADEAAHAADDAEALAALYRLHSDDAPPDGFIFDLLHRA
LQNENLPRLTVRLKAAISQFDNAAIYTIHGFCQRLLRDYAFLCQAPFDTELAEHKRERLL
TPAQDFWRTEVAADVHKARLVFKHRYTPENMLAEIQKYLSRPYLAFRRPEVDLAAAEAVL
QQSWQNIMPKLPELIETFWKIHPALNGNIYRKNTFEKLFAELMSAAATGTLPQDKDGKLM
MLSAAMLEDKLKKGQSANAAAFARLQALADLGHYLDEQNMAEENALIALQIDLLTHINHA
LAEQKKSSRERGFDDLLLDVHHALSQSPQRALLAETVAKNWRVALIDEFQDTDPLQYAIF
QHTFIAHGNPLFLVGDPKQAIYSFRGADIYAYLQAAEDAEHHYTLATNRRSHAQLINGIS
ALFRQKAQPFVLPHIDYANVDAARAKSRLAPPRTAIQVRWIDDDAQILKKDTLRRRAADY
CADEIAAALTEAAEGRLNYDGAPLQSGQIAVLVRTHNEGSLVSQALRARGVQSVLLHRES
VFAAPEAQALAALIGFWLQPQRTEPLRFVLGGVLFRQSAAELYALNYDEAALLEWIHSAE
AAALQWQQHGFYAAMQQFAARHGIETRLLAGGNSRSLTNYHQLLEKLAEEDEQNHNPAAL
QQWLLAEIQAAKQGRSSEAHLLRLESDEALVKIVTMHAAKGLQYPLVYCPFVWDAPSGKP
DSWQILHRQDQSEWLAKSQLEEADLQQLAEEEASERLRLLYVALTRAEEQLTLYAAHCDN
TAANTFAYLLEGGCDSRFADTAAAYAAEKKANKAEGEKAMLRRNWQRFIGQAPENSDFVF
TAEAPPEIARAPVAGFSDGHYQAAAMPARSFEFIRHTSFTGLSRHVHTRDDAREELQPAI
DPAEALSDERPSESLASLADNPHDIYHFPRGAHAGVCLHELLEHFDFSRPAAEQSEAARQ
ALTRYGFDESWLEAANGMLDAARLTPLTGSHTLAAQPAARRLPEMAFTLHMHDFRLDHLR
AWFAGPHLKLPAACIAAAQWLAFQDLQGYLNGFIDMVYQDADGQVCIIDYKSNHLGMHES
DYHQEAMNEAMAAHHYYLQALIYAIAVARYFKLRGQALPRIAVRYLFLRGMDGSGKGVWA
WDIDTADLAAWL
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgactgcccagcctttccacccgctcgatattcccattcacggcaccaatctgattgaa
gcctcggccggcaccggtaaaacctggggcattgccgccttgtttacacggctgattgtg
ctggaaaaaatgccggtggagcagattttggtggtcacgtttaccaaggcggccaccgcc
gaattgaaaacccgcctgcgtgcgcggctcgatgaagccttgcagacgctggaaatattg
ggcagcgccgatgaagccgcgcacgcggcggacgatgccgaagccttggccgcactttat
cgcctgcacagcgatgatgcgccgcccgatggctttattttcgatttgctgcaccgcgcc
ttgcaaaatgaaaatctgccgcgcctgacggtgcgcctcaaagccgccatcagccagttt
gacaacgccgccatctacaccatccacggcttttgccagcggctgttacgcgattatgcc
tttctctgccaagcgccgttcgacaccgaattggccgaacacaaacgcgaacgcctactc
acgcccgcgcaagatttctggcgcaccgaagtggccgccgatgtgcacaaagcgcgtttg
gtgttcaaacaccgctacacccccgaaaacatgctggccgaaatccaaaaatacctcagc
cgcccttatttggctttcagacggcctgaagtggatttggccgccgccgaagcggttttg
cagcaaagctggcaaaatattatgcccaagctgcccgagctgattgaaactttctggaaa
atccaccccgcgctcaacggcaatatctaccgcaaaaacacctttgaaaagctgtttgcc
gagctgatgagcgccgccgcaaccggcacgctgccgcaagataaagacggcaagctgatg
atgctttccgccgccatgttggaagacaaactcaaaaaaggccaaagcgccaatgcagcc
gcattcgcccgcctgcaagccttggccgatctcggccattatctggatgagcaaaacatg
gccgaagaaaacgcgctgattgccttgcagatcgatttgctcacccacatcaaccatgcg
ctggccgagcagaaaaaaagcagccgcgagcgcggcttcgacgatttgttgctcgatgtg
caccacgcgctcagccaaagtccgcagcgtgcgcttttggccgaaaccgtggcgaaaaac
tggcgcgtggcgctgatcgacgaatttcaagacaccgacccgctgcaatatgccattttt
cagcatacctttatcgcccacggcaacccgctgtttctcgtgggcgaccccaaacaggcg
atttacagctttcgcggtgccgatatttacgcttatctgcaagcagccgaagatgccgaa
caccactacacgctcgccaccaaccgccgcagccacgcgcaactgatcaacggtatcagc
gctttgttccggcaaaaagcgcagcctttcgtgctgccccatatcgattatgcgaacgtg
gatgctgcgcgcgcaaaaagccgcttagcgccgccgcgcacggctattcaggtgcgctgg
attgatgacgatgcgcagattttgaaaaaagacaccttgcgccgccgcgcggccgattat
tgcgccgacgaaatcgccgctgcgctaaccgaagccgccgaaggccgcctgaattatgat
ggcgcgccgctgcaatcagggcagattgccgtgctggtgcgcacccataacgagggcagc
ctcgtgagccaagctttgagggcgcgcggcgtgcaaagcgtgctgctgcaccgcgaatcg
gtgtttgccgcgcccgaagcccaagcgctggctgcgctgatcggcttttggctgcaaccg
cagcgcaccgagccgctgcgctttgtgctcggcggcgtgttgttccgccaaagcgctgcc
gagctttacgcgctcaactacgatgaagccgcgttgctcgagtggatacattctgccgag
gccgccgccttgcaatggcagcaacacggcttttatgccgccatgcagcaatttgccgcg
cgccacggcatcgaaacgcgcctgctcgccggcggcaacagccgcagcctcaccaattac
caccagcttttggaaaagctcgccgaagaagacgagcaaaaccacaaccccgccgctttg
cagcaatggctgctggccgaaatccaagccgccaaacaaggccgcagcagcgaggcgcat
ttgttgcggctggaaagcgatgaagcgctggtgaaaatcgtcaccatgcatgcggcaaaa
gggctgcaatatccgctggtttattgcccgtttgtgtgggatgcccccagcggcaagccc
gacagctggcagattctgcaccggcaagatcagagcgaatggctggccaaaagtcagctt
gaagaagccgatttgcagcaattggccgaagaagaagccagcgagcgcctgcgcctgctt
tatgtggcgctcacccgcgccgaagagcagctcacgctttatgccgcccattgcgacaac
accgccgccaacacctttgcctatctgctcgaaggcggctgcgacagccgctttgccgac
accgccgccgcttatgcggccgagaaaaaagccaataaggcagagggcgagaaagcgatg
ttgcggcgcaactggcagcgctttatcgggcaagcgcctgaaaacagcgattttgtgttc
accgcagaagcgccgcccgaaatcgcccgcgcacctgtcgccggcttttcagacggccat
tatcaagccgccgccatgcccgcacgcagctttgaatttatccgccacaccagcttcacc
ggcctgagccgccatgtgcacacacgcgatgatgcgcgcgaggaattgcagccggccatc
gatccggctgaggccttgtctgacgagaggccgtctgaaagccttgcaagccttgctgat
aatccgcacgatatttatcattttccgcgcggcgcacatgccggtgtgtgtttgcacgaa
ttgctcgagcatttcgatttcagccgaccggccgccgagcaaagcgaagccgcccgtcaa
gccttaacgcgctacggctttgacgaaagctggctggaagcggcaaacggcatgctcgat
gccgcccgcctcacaccgctcaccggcagccacactttagccgcgcagcccgccgcccgc
cgcctgcccgaaatggcgtttaccctgcatatgcacgatttccggctcgatcacttgcgc
gcctggtttgccggcccgcatctcaagctgcccgccgcctgcattgctgcggcgcaatgg
ctggcttttcaagatctgcaaggctatctcaacggctttatcgacatggtgtatcaagac
gccgacggccaagtgtgcatcatcgactacaaatccaatcatctgggcatgcacgaatcg
gattaccaccaagaagccatgaacgaagccatggctgcgcatcattattatctgcaagcg
ctgatttacgcgattgccgttgcgcgctatttcaagctgcgcgggcaggccttgccgcgt
atcgccgtgcgctatctgtttttgcgcgggatggacggcagcggcaaaggcgtgtgggca
tgggatatcgacaccgccgatttggccgcatggctttag
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