Uruburuella suis: LVJ78_06195
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Entry
LVJ78_06195 CDS
T08067
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
usu
Uruburuella suis
Pathway
usu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LVJ78_06195 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
usu03400
]
LVJ78_06195 (mutM)
Enzymes [BR:
usu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
LVJ78_06195 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LVJ78_06195 (mutM)
DNA repair and recombination proteins [BR:
usu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LVJ78_06195 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
HCBP_related
Motif
Other DBs
NCBI-ProteinID:
UOO78325
LinkDB
All DBs
Position
complement(1380459..1381286)
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AA seq
275 aa
AA seq
DB search
MPELPEVETTLRGISPHIHGQTVANTIIRQPKLRWRIPDDLAHTLAGQTVLECTRRAKYL
LIRFATGIVLIHLGMSGSLRIFTAGDARISSPDKHDHVDIVFADGTVLRLHDPRRFGAVL
WFAGAPEHHPLLAALGPEPLSPQFNADYLYEKLRKQKRAAKLALMDNAVVVGVGNIYANE
CLFKAGVSPMRAANQITRQECALLVETIQAVLQRAIATGGSTLRDFVNSDGKSGYFQQEY
TVYGRHNQPCLQCGDLIHKAVIGQRGTFYCTRCQK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgcccgaagtcgaaaccaccctacgcggcatcagcccgcatatccacggc
caaaccgttgccaataccattattcgccaacccaagctgcgctggcgcattcccgatgat
ttggcacacaccttggcaggccaaacggtgctcgaatgcacgcgccgtgccaaatatctg
ctgattcgttttgccaccggcattgtgctgattcacttaggcatgtcgggcagcctgcgc
atttttaccgccggcgatgcccgcatttcctcccccgacaaacacgaccatgtggatatc
gtgtttgccgacggcaccgtgctgcgcctgcacgacccgcgccgcttcggtgccgtgctg
tggtttgccggcgcgcccgagcaccaccctttgctggccgcgctcggccccgagccgctc
tcgccgcaatttaatgccgattatctttacgaaaagctgcgcaaacaaaagcgcgcggcc
aagcttgcgctgatggacaacgctgtggtggtgggcgtgggcaatatttatgccaacgaa
tgcctgtttaaagccggcgtttcccccatgcgggccgccaatcaaatcacccgccaagaa
tgcgctttattggtggaaaccatccaggccgtgttgcagcgcgccatcgccaccggcggc
agcaccttgcgcgattttgtcaacagcgacggcaaaagcggctatttccaacaggaatac
accgtgtatggccgccacaaccagccctgcctgcaatgcggcgacttaatacacaaagcc
gttatcggccaacgcggcacgttttattgcacacgttgccaaaaataa
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