Uruburuella suis: LVJ78_07235
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Entry
LVJ78_07235 CDS
T08067
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
usu
Uruburuella suis
Pathway
usu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
usu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ78_07235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
usu03019
]
LVJ78_07235
Enzymes [BR:
usu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LVJ78_07235
Messenger RNA biogenesis [BR:
usu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVJ78_07235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Serendipity_A
AAA_22
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
UOO78511
UniProt:
A0AAE9KFS6
LinkDB
All DBs
Position
complement(1602700..1604100)
Genome browser
AA seq
466 aa
AA seq
DB search
MNPFASLGLGSEIVSALTEQGYETPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPS
LERLKRYATPSTSPAMHPVRMLVLTPTRELADQIDQNVQAYIKNLPLRHAVLFGGVNMDA
QTRALRAGCEIVVATVGRLLDHVKQKNINLSKVEIVVLDEADRMLDMGFIDDIRSIMQML
PKQRQTLLFSATFAPPIRKLAQDFMKNPEQVEVAAQNTANANVEQHVIAVDTARKRSLLE
RLIVDLNMNQVIVFCKTKQSVDQVNRDLQRRNIAAQAIHGDKSQQTRLETLAAFKEGRLR
VLVATDVAARGLDIAELPFVINYELPTQPEDYVHRIGRTGRAGADGVAISLMDEAEQKMF
ESIKALTGSEIAVERIEGFEPRWWRNGDEPAAEVAVTTEARARSSSRNERPAREAGRSER
TDKRSESRTAERNDAGSACGKIAGRSRRSRRERPKCALLQAGYGAQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtttgcatctttgggcttgggcagcgaaatcgtgtctgcgctcaccgagcag
ggctacgaaacgcccacgccgattcaggccgccgccattcccaaggccttggccggccac
gatttgcttgccgccgcccaaaccggcaccggcaaaaccgccgcctttatgctgcccagc
ctcgagcgcctcaagcgctatgccacgcccagcacctcgcccgccatgcatccggtgcgc
atgttggtgctcacgcccacgcgcgaattggccgaccaaatcgatcaaaacgtgcaagcc
tatatcaaaaacctgccgctgcgccacgccgtgctgtttggcggggtgaacatggatgcg
caaacccgtgccctgcgcgccggctgcgaaatcgtggtggccacggtcggccgcctgctc
gatcatgtgaagcagaaaaacatcaacctgagcaaagtggaaatcgtggtgctcgatgag
gccgaccgcatgctcgacatgggctttatcgacgacatccgcagcatcatgcagatgctg
cctaagcagcgccaaaccctgcttttttccgccacattcgctccgccgatccgcaagctc
gcgcaagactttatgaaaaaccccgagcaagtggaagtggccgcgcaaaacaccgccaat
gccaatgtggagcagcatgtgattgcggtggacaccgcccgcaaacgcagcctgcttgag
cggttgattgtggatttgaacatgaatcaggtgatcgtgttttgcaaaaccaagcaaagc
gtggaccaggtcaaccgcgatttgcagcggcgcaatatcgctgcccaagcgattcacggc
gacaaatctcagcaaacccgcctcgaaaccttggcggcgtttaaagaagggcggttgcgc
gtgctggtggccaccgatgtggccgcgcgcgggctcgatattgccgaattaccgtttgtg
atcaactatgaattgcccacccagcccgaagattatgtgcaccgcatcggccgaaccggc
cgcgccggcgccgacggcgtggcgatttcgctgatggatgaagccgagcaaaaaatgttt
gaatccatcaaagcactcaccggcagcgaaatcgccgtggagcgcatcgaaggcttcgag
ccgcgctggtggcgcaatggcgacgagccggccgccgaagtggctgtcacaaccgaagcg
cgtgcgcgcagcagcagccgcaatgagcgccctgcgcgtgaggccggccgcagcgagcgc
accgataaacgcagcgaaagccgcaccgccgagcgcaacgatgccggcagcgcttgcggc
aaaatcgccggccgcagccgccgcagccgccgcgagcgccccaaatgcgcgcttttgcaa
gccggctacggcgcacaataa
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