Uruburuella testudinis: LVJ83_00005
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Entry
LVJ83_00005 CDS
T08135
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ute
Uruburuella testudinis
Pathway
ute03030
DNA replication
ute03410
Base excision repair
ute03420
Nucleotide excision repair
ute03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ute00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ83_00005 (polA)
03410 Base excision repair
LVJ83_00005 (polA)
03420 Nucleotide excision repair
LVJ83_00005 (polA)
03440 Homologous recombination
LVJ83_00005 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ute03032
]
LVJ83_00005 (polA)
03400 DNA repair and recombination proteins [BR:
ute03400
]
LVJ83_00005 (polA)
Enzymes [BR:
ute01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ83_00005 (polA)
DNA replication proteins [BR:
ute03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LVJ83_00005 (polA)
DNA repair and recombination proteins [BR:
ute03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LVJ83_00005 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LVJ83_00005 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
UOO81903
UniProt:
A0ABY4DS92
LinkDB
All DBs
Position
complement(131..2908)
Genome browser
AA seq
925 aa
AA seq
DB search
MNTLLLVDGSSYLYRAFYAMTHLSAPDGTPTNAVYGVLNMLRRLRTDVPHDYCACVFDAK
GSNFRHELFADYKATRPPMPDDLRPQADMLPELVALMGWPVLKVAGVEADDVIGTLAHQA
DEAGMKVIVSTGDKDMAQLVNERITLVNTMSNETLDIEGVVNKFGVRPEQIIDYLALIGD
KVDNVPGVEKCGPKTAVKWLAEYGSLQNVMAHAADIKGKVGENLQAALPHLPLSYQLITI
KTDVDLQQELPEGMQSLHRRTPKWEALAEHFQTLGFKSWLKEAEAQIGNGNGRGGDLFAA
ETAPPPAAAVAAPPPVPEIAPAPDKLDYRAITTETAFAELLAKLDAATAVGLDTETTSLD
AINAALVGISIAFAPGEAVYIPLGHTPTAAPEQLDLHEVLGRLKPYLESGRLKKIGQNLK
YDEHVFYNYGIKLNGIAGDAMLASYIIESHLGHGLDELAERWLGLPTITYESLCGKGAKQ
ISFADVAIEQATEYAAQDADFALRIEGRLKTAMDAKQLEMYQNLELPVAEVLFVMERNGV
LIDKDELARQSHTLGSELVQLEQQAYEIAGQPFNLNSPKQLQEILFGKMGIPTKGLKKTA
SGGVSTNEAVLETLAPDYPLPSVILQNRSLAKLKSTYTDKLPEMINPHSGRVHTTYAQAV
AITGRLASNNPNLQNIPIRTEAGRKVRRAFIAPEGSKIVSADYSQIELRIMAHLSGDKTL
LQAFKNGEDVHRRTAAEVFGIAPENVSSEQRRYAKTINFGLIYGMGQYGLAKSLGIDNLS
AKSFIDRYFARYPGVADYMQRTKELAAAQGYVETVSGRRLYLPGIHSKNGNERAGAERAA
INAPMQGTASDLIKRAMVDVLAWLVSDGLKSKLIMQVHDELVLEVPEAELGLVQAKLPEI
MQKAAVMDVPLLAEVGVGENWEEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaataccctgttgctggtcgacggctcttcttatctctatcgcgcgttttacgccatg
acccacctttccgcgcccgacggcacgcccaccaatgccgtatacggcgtgctcaatatg
ctgcgccgcctgcgcaccgacgtgccgcacgattattgcgcctgcgtgtttgacgccaaa
ggcagcaatttccgccacgagctgtttgccgactacaaagccacccgcccgcccatgccc
gacgatttgcgcccgcaggccgatatgctgcccgaattggtggcgctgatgggctggccg
gtgttgaaagtggccggagtagaagcggatgacgttatcggcacattggcacatcaggct
gatgaagcaggaatgaaggtgattgtgtctaccggcgataaagacatggcgcaattggtt
aacgagcgcatcacgctggtgaataccatgagcaacgaaacgctggatatcgagggcgtg
gtcaacaaattcggcgtgcgccccgagcagattatcgattatctggccttaatcggcgac
aaagtcgacaatgtgcccggcgtggaaaaatgcggccccaaaaccgctgtcaaatggctg
gccgaatacggcagcctgcaaaacgtgatggcgcacgcggccgatatcaaaggcaaagta
ggcgaaaatctgcaagccgccttgccgcacctgccgctgtcttaccaactgattaccatc
aaaaccgatgtcgatttgcagcaagagctgcccgagggcatgcagagcctgcaccggcgc
accccgaaatgggaggcgctggccgagcatttccaaacactcggctttaagagctggttg
aaagaagccgaagcccaaatcggcaacggcaacggccgcggcggcgatttgtttgccgcc
gaaaccgcaccgccgcctgctgctgcggttgccgcaccgccgcccgtgcccgaaatcgcg
cccgcacccgacaagctcgattaccgcgccatcaccaccgaaaccgcgtttgcagaattg
ttggccaaactcgatgccgctaccgccgtcgggctcgacaccgaaaccaccagcctcgat
gccatcaacgccgcgctggtgggtatcagcatcgcctttgcgcccggcgaagccgtgtat
atcccgctcggccacacccccaccgccgcgcccgaacaactcgatttgcacgaggtatta
ggccgtctgaaaccctatctggagtcaggccgtctgaaaaaaatcggccaaaacctcaaa
tacgacgaacacgttttttacaactacggcatcaaattaaacggcattgccggcgatgcc
atgctggcctcgtatatcattgaaagccatttagggcacgggctcgatgaattggccgaa
cgctggctcggcctgcccaccatcacttatgaatcgttgtgcggcaaaggcgccaagcag
atttcatttgccgatgtcgccatcgagcaagccaccgaatacgccgcccaagatgccgat
ttcgccctgcgcatcgaaggccgtctgaaaacagcaatggacgccaaacagcttgaaatg
tatcaaaacctcgagctgcctgtggccgaagtattgtttgtgatggagcgcaacggcgta
ttgattgataaagacgagctggcacgccaaagccacacgctgggcagcgagcttgtgcaa
ctggaacagcaggcctacgaaatcgccggccagcccttcaacctcaattcgcccaagcaa
ttgcaggaaatcctgttcggcaaaatgggcatccccaccaaaggcctgaaaaaaaccgca
tccggcggcgtgtcgaccaacgaagccgtgctcgaaaccctcgcgcccgactaccccctg
cccagcgtgattctgcaaaaccgcagcctcgccaaactcaaatccacctacaccgacaag
ctgcccgaaatgattaacccgcacagcggccgcgtgcacaccacctatgcccaagccgtc
gccatcaccggccggctcgccagcaacaaccccaatctgcaaaacatccccatccgcacc
gaagccggccgcaaagtgcgccgcgcctttatcgcccccgagggcagcaaaatcgtatcc
gccgactattcccaaatcgaattgcgcatcatggcacacttgagcggcgacaaaaccctg
ctccaagcctttaaaaacggcgaagacgtgcaccgccgcaccgccgccgaagtgttcggc
atcgcccccgaaaacgtcagcagcgagcagcgccgctacgccaaaaccatcaacttcggc
ctgatttacggcatgggccaatacggcctggccaaatcgctcggcatcgataatttgtcg
gccaaaagctttatcgaccgctacttcgcccgctaccccggcgtagccgactacatgcag
cgcactaaagagctcgccgccgcccaaggctatgtcgaaaccgtgtccggccgccgcctc
tacctgcccggcatccacagcaaaaacggcaatgaacgcgcaggtgcagaacgcgccgcc
atcaacgcccccatgcagggtaccgcatccgaccttatcaaacgcgccatggtcgacgtg
ttggcctggctcgtttcagacggcctcaagagcaaactgattatgcaggtgcacgatgaa
ttggtgctggaagtgccggaggcggagctgggtttggtgcaagccaaactgcccgaaatt
atgcagaaagccgccgtgatggacgtgccgctgctggccgaagtgggcgtgggagagaat
tgggaagaggcgcattga
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