Uruburuella testudinis: LVJ83_05955
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Entry
LVJ83_05955 CDS
T08135
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
ute
Uruburuella testudinis
Pathway
ute03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ute00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ83_05955 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ute03400
]
LVJ83_05955 (recB)
Enzymes [BR:
ute01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ83_05955 (recB)
DNA repair and recombination proteins [BR:
ute03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ83_05955 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
Motif
Other DBs
NCBI-ProteinID:
UOO83000
LinkDB
All DBs
Position
complement(1284919..1288503)
Genome browser
AA seq
1194 aa
AA seq
DB search
MTPATPFDPLEVPIAGTNLIEASAGTGKTWGIAALFTRMILLEHLPVENILVVTFTKAAT
AELKTRLRKRLDEALQALEDGSCAGITDAEGLQPYCADEFISALLTRALAQESHERLTVR
LKAAIGQFDNAAIYTIHGFCQRLLRDYAFLCQAPFDTELAEHSRTRLLTPAQDFWRTQVA
ADNHQARLAFQYKYTPERMLAEIQPFLNRPYLSFRRPEADLAQAEHKVQQTWQRIVPILP
ELAQTFWQVHPQLNGNNYRKTTFEPLFARLQAAADNGCLPKPEEKLPMLAADTLQSKTKK
TARPDTAAFARLQVLADLGRDLAAQSQVETEALIALPLDMLAYINHALAEQKKSQRDRSF
DDLLIDTHQALTCNPHRAELAAAAAANWRVALIDEFQDTDPLQYEIFNRIFTAHGNPLFL
VGDPKQAIYSFRGADIYAYLQAARDADHRYTLATNRRSHRKLIKSIGALFQQKQHPFVLP
HIDYTDVDAARAHSNLTPPRSAVQVRWIDDNQQIITKEILRSRAAEYCADEIAAVLNQAA
QGRLNLNGAPLQSGDIAVLVRTHNEGGLISRALKARNVQSVLLQRESVFATAEAAAIAAL
IGFWLQPQRTEPLRFVLGSVLFRQTADELYALNQNEAALLDWITSAETAAAQWQRHGFYA
AMQQFTARHGIETRLLAADDERSLTNYHQILEKLAEEDEQSHSPSSLHQWLLAQIQAAGQ
GQRSDSHLLRLESDEALVKIVTMHASKGLQYPLVFCPFVWDAPDNKPAAWQILHRSNGSE
LLADTQLDEADQIQLADEEASERLRLLYVALTRAEEQLVIYAAHCNHTAVNTFAYLLEGG
RHSNRSDTQAAYLAEKKINDAAGEKAMLYNNWQRFIDQAPADTEFAFVETAPEPATGPAA
RLSDGHYQAVAFPPRPFDFIRHTSFTGLSRHTQTRDHERDELQPAIDPAEAAAAENPPEH
TTTGSPGDIHHFPRGAQAGICLHELLENFDFNTAADSRSEAVCTTLARYGFEAEWLNAVT
AMLNHTRLTPLTGSHALADQPAARRLPEMAFTLHMHDFKLSRLREWFARSSLPPECAAAA
QWLDFADVEGYLNGFIDMVYQDSDGQVCIIDYKSNHLGMGSADYTPQAMNEAMAEHHYYL
QALIYAIAVARYFKLRNRALPVIAVRYLFLRGLDGRGNGVWAWNIDTADLAEWL
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaccccagccaccccgttcgacccgcttgaggtgcccattgccggcaccaaccttatc
gaagcttcagccggcaccggcaaaacttggggcattgcggccttgtttacccgcatgatt
ctgctggaacacctgccggtagaaaacatattggtggttaccttcaccaaagcagccacc
gccgaattgaaaacccgcttgcgcaaacgcttggatgaagccctgcaagcgctggaagac
ggcagctgcgccggcatcaccgatgcagaaggcctgcaaccctattgtgccgacgaattt
atttccgccctactcacccgcgcgctggcgcaagaatcacacgagcgcctgacagtgcgc
ctcaaagccgccatcggccaattcgacaacgccgccatctacaccatacacggtttctgc
cagcggctgctgcgcgattacgcctttctgtgccaagcccctttcgataccgagctggcc
gaacacagccgcacgcgcctgctcacgcccgcccaagatttctggcgcacacaagtggcc
gccgataaccaccaagcacgtttggccttccaatacaaatacacgcccgagcgcatgctg
gccgaaatccaaccgtttctcaaccgcccctatttgagtttcagacggcctgaagccgat
ttggcgcaagctgaacacaaggtgcagcaaacatggcagcgcattgttcccatcctgccc
gagctggcacaaaccttttggcaggttcacccgcaactcaatggcaacaactaccgcaaa
accactttcgagccactgtttgcccgattgcaggccgccgccgacaacggctgcctgcct
aaacccgaagaaaagctgcccatgctggcggccgacaccctgcaaagcaaaaccaaaaaa
accgcccgccccgatacagctgcctttgcccgcctgcaagtgctggccgatctcggccgc
gatctggctgcacaaagccaagtcgaaaccgaagcgctgattgcgctgcccctagacatg
ctcgcctacatcaaccacgccctagccgagcaaaaaaaatcccaacgcgaccgcagcttt
gacgacttgctgatcgacacccaccaagccctcacctgcaacccgcaccgcgccgagctg
gccgccgccgcagccgccaactggcgagtggctctgattgacgaatttcaagataccgac
ccgctgcaatacgaaattttcaaccgcatctttaccgcccacggcaacccgctgtttctt
gtgggcgaccccaagcaagccatctacagctttcgcggcgccgatatctacgcctatctg
caagcggcgcgcgatgccgaccaccgctacaccctcgccaccaaccgccgcagccaccgc
aaactgattaaaagcattggcgcgctgttccaacaaaaacaacacccgtttgtgttgccg
cacatcgattacaccgatgtcgacgccgcccgcgcgcacagcaacctgacaccgccgcgc
agcgccgtgcaagtgcgctggatagacgacaaccagcaaatcataaccaaagaaatcctg
cgcagccgtgccgccgaatattgcgccgacgaaatcgccgccgtgctcaatcaggccgcg
caaggccgtctgaatttaaacggcgcgccgctgcaatcgggcgatattgccgttttggtg
cgcacccacaacgaaggcggcctgatcagccgggcgctgaaagcacgcaacgtacaaagc
gtgcttttgcagcgcgaatcggtgtttgccaccgccgaagccgctgccattgccgccctg
atcggcttttggctgcaaccgcagcgcaccgagccgctgcgctttgtgttgggcagcgtg
ctgttccggcaaacggccgacgagctttacgcactcaaccaaaacgaagcagcgctgctc
gattggattacttctgccgaaaccgcagccgcacagtggcagcggcacggcttttacgcc
gccatgcagcaattcaccgcccgccacggcatcgaaacccgcctgctggccgccgacgac
gaacgcagcctcaccaactaccatcaaattttagaaaaactggccgaagaagacgaacaa
agccacagcccctcatcgctgcaccaatggctgctggcgcaaattcaggccgccggacaa
gggcagcgcagcgacagccacctgctgcggctggaaagtgatgaagcgctggttaaaatt
gttaccatgcatgcctcaaaaggcttgcaatatccgctggttttctgcccttttgtgtgg
gacgcccccgacaacaaaccggcagcctggcagattctgcaccgcagcaacggcagcgag
ctgctcgccgacacccagcttgacgaagccgaccaaatccagctggccgacgaagaagcc
agcgaacgcctgcgcctgctttacgtagcactgacccgcgccgaagaacagctggtgatt
tacgccgcccattgcaaccacaccgccgtcaacaccttcgcctatctgctcgaaggcggc
cgccacagcaaccgcagcgacacacaggccgcctatctcgccgaaaaaaaaatcaacgat
gccgcaggcgaaaaagccatgctctacaacaactggcagcgctttatcgaccaagccccg
gcagacactgaatttgcatttgtcgaaaccgcacccgagccggccacaggccctgccgcc
cgcctttcagacggccattatcaggccgttgccttcccgccgcggccgtttgactttatc
cgccacaccagctttaccggcttaagccgccacacccaaacacgcgaccacgaacgcgac
gaattgcagccggccatcgaccccgccgaggccgccgccgcagaaaacccgcccgaacac
acaacaacaggctcgcccggcgacatccaccactttccgcgcggcgcccaggccggcatc
tgcctgcacgaattgctggaaaattttgacttcaacaccgccgccgacagccgcagcgaa
gcggtttgcaccacgctggcccgttacggcttcgaagcagaatggctaaatgccgttacc
gccatgctcaatcacacccgtctgacaccgctcaccggcagccacgccctggccgaccaa
cccgccgcccgccgtctgcccgaaatggcctttacgctgcacatgcacgatttcaaactc
agccgtttgcgcgaatggtttgcccgcagcagcctgccgcccgaatgcgccgccgccgca
caatggcttgattttgccgatgtagagggctatctcaacggctttatcgatatggtgtat
caagattcagacggccaagtgtgtattatcgactacaaatccaaccacttgggcatgggc
agcgccgactacacgccccaagccatgaatgaagcgatggccgaacaccactattacctg
caagcgctgatttacgccattgccgttgcccgttatttcaagctccgcaaccgagcgctg
ccggttattgccgtgcgctaccttttcctgcgcgggctcgacggccgcggcaacggcgta
tgggcgtggaacattgataccgccgatttggctgaatggctctag
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