Uruburuella testudinis: LVJ83_09480
Help
Entry
LVJ83_09480 CDS
T08135
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
ute
Uruburuella testudinis
Pathway
ute03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ute00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LVJ83_09480 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ute03400
]
LVJ83_09480 (recD)
Enzymes [BR:
ute01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LVJ83_09480 (recD)
DNA repair and recombination proteins [BR:
ute03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LVJ83_09480 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
AAA_11
UvrD_C_2
Viral_helicase1
Helicase_RecD
AAA_22
UvrD-helicase
SH3_13
AAA
AAA_16
T2SSE
SLFN-g3_helicase
nSTAND3
UvrD_C
AAA_28
SRP54
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
UOO81198
LinkDB
All DBs
Position
complement(2055176..2056915)
Genome browser
AA seq
579 aa
AA seq
DB search
MSAISVEAYQAAADAAVMLLQRHAPQAAGCAAPYLPRLFAALSDGHSFIWLDEAEAAALA
AAQPVVGSGGDTPLVLAGRRLFLGRMWQLERDLAAEIVRLAKAPLAPADWMRAGRNLQDW
FAGQGSEGQRDAAALALLQPFMLISGGPGTGKTTTVAKLLGLLCDGEAQMPSIALAAPTG
KAAAHMARALHRALADFDLSEPVRSHLLQLEGQTVHRLLKLRPPQMRPLFDAEQPLALDV
LIVDEASMLDIALLLQLLRAVPTGCRVVLLGDENQLPSVGAGAVLAALAQPTLLGEDTAR
ELQAMLPQHGFQTAALPLPLSQNVARLKVSHRFGDNSGIGCLARAVAAEDVSAVWAAFDR
FPDDLQLRERGSREQAEAIYALQADYWQAVDAGDVAQAFARQTDVVVLAAWRDDAEAFNQ
AYRRCLQQHGRVRADAPWFAGQVLMIERNDYALNVFNGDIGLVLPDEEGVLSAWFAAAQG
YRKIPLSRLSSYATAFAMTVHKSQGSEYRDVWLLPPSVTMPSESGGGLNKALLYTAVTRA
RERFVFWGSRAAFQTACTADEQRRSSLREMIGRAWGGEL
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccatttctgttgaagcttatcaggctgctgccgatgcggcggtgatgttgttg
caacgccatgcgccacaggcggccgggtgtgccgcaccgtatctgccgcgtttgtttgcc
gcgctttcagacggccattcgtttatttggttggacgaggcggaagcagcggcgctggct
gcggctcaaccggtggtcggcagtggcggcgacacgccgttggtgctggcgggcagacgt
ttgtttttggggcgtatgtggcagcttgagcgtgatttggcggcggaaatcgtgcgcttg
gccaaagcgccgcttgcgccggcagactggatgcgggcggggcggaatttgcaggattgg
tttgccggccaaggcagcgaagggcagcgcgatgcagcggcgttggcgctgttgcagcct
tttatgctgatcagcggcggcccgggtacgggcaagaccacgacggtggccaagctgttg
gggttgttgtgcgatggtgaggcgcagatgccgagtattgcgctggccgcgcccaccggc
aaggcggcggcgcatatggcgcgtgcgctgcatcgtgcgctggctgattttgatctgtct
gagccggtgcgcagccatttgttgcagctggaggggcagactgtgcaccggttgttgaaa
ctgcgcccgccgcagatgcgcccgctatttgacgccgagcagccgttggcgttggatgtt
ttgattgtcgatgaagcttcgatgttggatatcgcgctgctgttgcagttgctgcgggcg
gtacccaccggctgccgggtggtattgctgggcgatgaaaaccagctgccttctgtgggc
gccggcgcggtgctggcggcgctggcgcagccgacactgctgggtgaagatacggcgcgc
gaattgcaggcgatgttgccgcaacatggttttcagacggccgcgctgcccttgcctttg
tcgcaaaatgtggcgcgcttaaaggtcagccaccgtttcggcgacaacagcggcatcggt
tgtttggcacgcgcggtggcggcggaggatgtctcggcggtgtgggctgcgtttgaccgt
tttcctgatgatttgcagctgcgcgagcgtggcagccgcgaacaggccgaggcgatctat
gctttgcaggcggattattggcaggcggtggatgcgggcgatgtggcgcaggcgtttgcc
cggcaaactgatgtggtggtgttggcggcgtggcgcgatgatgccgaagcgtttaatcag
gcctaccgccgctgtttgcaacagcatggccgagtgcgtgctgatgcgccgtggtttgcc
gggcaggtgctgatgattgagcgcaacgattatgcgctgaatgtgtttaacggcgacatc
ggtttggtgttgccggatgaggagggcgtgttgtctgcctggtttgccgccgcgcaaggc
taccgtaaaattccgctcagccgcttgagcagctatgctacggcgtttgcaatgacggtg
cacaaaagccagggttcggaatatcgtgatgtgtggctgttgccgccttctgtgacgatg
ccgtctgaaagcggcggcgggctgaataaggcgctgctgtatacggcggttacccgtgcc
cgtgagcggtttgtgttttggggcagccgggcggcgtttcagacggcctgcacggctgac
gaacagcggcgcagcagcttgcgggagatgatagggcgggcgtggggcggggagctctag
DBGET
integrated database retrieval system
