Uruburuella testudinis: LVJ83_12965
Help
Entry
LVJ83_12965 CDS
T08135
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ute
Uruburuella testudinis
Brite
KEGG Orthology (KO) [BR:
ute00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ute03032
]
LVJ83_12965 (topA)
03400 DNA repair and recombination proteins [BR:
ute03400
]
LVJ83_12965 (topA)
Enzymes [BR:
ute01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVJ83_12965 (topA)
DNA replication proteins [BR:
ute03032
]
Prokaryotic type
DNA Topoisomerases
LVJ83_12965 (topA)
DNA repair and recombination proteins [BR:
ute03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVJ83_12965 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF5795
Motif
Other DBs
NCBI-ProteinID:
UOO81800
UniProt:
A0ABY4DRZ8
LinkDB
All DBs
Position
complement(2827760..2830069)
Genome browser
AA seq
769 aa
AA seq
DB search
MAKNLLIVESPSKAKTLKKYLGSEFEILASYGHVRDLVPKNGAVDPENDFAMKYQLVARN
SKHVDAIVAAAKEAENLYLATDPDREGEAISWHLQEILKSKRGLKNLKPQRVVFHEITKN
AVLDAIAHPRELEVNLVDAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIC
ERENEIRAFETQEYWTVHLDSHKGRSKFSAKLVQYKGDKLEQFALPDEAAQADALKALEG
KEAQVAAIEKKKRSRNPAAPFTTSTMQQDAVRKLGMTTDRTMRTAQQLYEGMDVGQGAIG
LITYMRTDSVTLSDEALTEIRHYIENKIGKDYLPSSAKQYKTKSKNAQEAHEAIRPTSVY
RTPESVKPFLSADQFKLYQMIWQRTVACQMTPAKFDQTTVDIAVGEGVFRVTGQVQTFAG
FLSVYEEGTDDSDESEDNKKLPEMKEGETLPVDALYGEQHFTSPPPRFNEATLVKALEEF
GIGRPSTYASIISTLKDREYVTLEQKRFMPTDTGDIVNKFLTEHFAQYVDYHFTAKLEDQ
LDDIASGKRQWVPVMSQFWKGFDKQVKEKEGIERAKFTTEELDEICPKCGNHKLQIKFGR
NGRFIACAGYPECSYTRNANETAEEAAERQAKDEAEQAELAGRECPKCGGGLVYKYSRTG
SKFIGCANYPKCKHIEPLEKPKDTGVVCPQCGKGHLVERKSRYGKLFYSCSTYPDCNYAT
WNPPIAEECPNCHWPVLTIKTTKRWGVEKVCPQKECGWKEQIEPPAPKE
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacctgttgattgtagaatcaccctccaaagccaaaacactgaaaaaatac
ctcggcagcgaatttgaaatcctcgcttcctacggtcacgtgcgtgatttggtgccgaaa
aacggcgcagtcgatccggaaaacgatttcgccatgaaataccagctggttgcccgcaac
agcaaacacgtcgatgccatcgtggctgcggccaaggaggcagaaaacctgtatctcgcc
accgacccggatagagaaggcgaggccatttcatggcacttgcaggaaatcctcaaatcc
aaacgcggcctgaaaaacctcaaaccgcagcgggtcgtatttcacgaaatcaccaaaaac
gctgtgctcgacgccattgcccacccgcgcgaattggaagtgaatctggtagacgcccag
caggcgcgccgcgcattggattatctggtcggcttcaacctctcgccgctgttgtggaaa
aaaatccgccgcggcttgagcgccggccgcgtacaaagccccgccctgcgcctgatttgc
gagcgtgaaaacgaaatccgcgcctttgaaacccaagaatattggacggtgcatctcgac
agccacaaaggccgcagcaaattcagcgccaaactggtgcaatataaaggcgacaaactc
gaacaattcgccctgcccgacgaagccgcccaagccgatgcgttgaaagcgcttgagggc
aaagaggcgcaagtggccgccatcgaaaagaaaaaacgcagccgcaaccccgccgcaccg
tttaccacctccaccatgcagcaagatgccgtgcgcaaactcggcatgaccaccgaccgc
accatgcgcaccgcccagcaactttatgaaggcatggatgtcggccaaggcgccatcggt
ttgattacctatatgcgtaccgacagcgtgaccctttccgatgaagccctcaccgaaatc
cgccactacattgaaaataaaatcggcaaagattatctgccctcatcggccaaacaatac
aaaaccaaatccaaaaatgctcaagaagcccacgaagccatccgtccgacttcggtttac
cgcacgcccgagagcgtgaagccctttctgagcgccgaccaattcaagctttatcaaatg
atttggcagcgcactgttgcctgccagatgaccccggccaaattcgaccaaaccaccgtc
gatatcgccgtaggcgagggcgtattccgcgtaaccggccaagtgcagacctttgccggc
tttttgagtgtgtatgaagaaggcaccgacgacagcgatgaaagcgaagacaacaaaaaa
ctgcccgagatgaaagaaggcgaaaccctgcctgttgatgcgctttacggcgaacaacac
ttcaccagcccgccgccgcgcttcaacgaagccacgctggtaaaggcattggaagaattc
ggcatcggccgcccctccacctacgccagcatcatctccacgctcaaagaccgcgaatac
gttacccttgagcaaaaacgctttatgcccaccgacaccggcgacatcgtgaataaattc
ctcaccgaacacttcgcccaatatgtcgattaccacttcaccgccaaactcgaagaccag
ctcgacgacatcgccagcggcaaacgccaatgggtgcccgtgatgagccaattttggaaa
ggcttcgacaaacaggtaaaagaaaaagaaggcatcgagcgcgccaaatttaccaccgaa
gagctggacgaaatctgcccgaaatgcggcaaccacaaactgcaaatcaaattcggccgc
aacggccgcttcatcgcctgcgccggctaccctgaatgcagctacacccgcaacgccaac
gaaaccgccgaagaagccgccgaacgccaggccaaagacgaagccgaacaagccgagctg
gccggccgcgaatgccccaaatgcggcggcggcctggtgtataaatacagccgcaccggc
agcaaatttatcggttgtgccaactaccccaagtgcaaacacatcgagcccttggaaaag
cccaaagataccggcgtggtttgcccgcaatgcggcaaaggccatctggttgaacgcaaa
tcccgctacggcaaacttttttacagttgcagcacctaccccgactgcaactacgccact
tggaatccgccgattgcagaagaatgcccgaactgccattggccggttttgaccatcaaa
accaccaaacgctggggcgtggaaaaagtgtgcccgcagaaagaatgcggttggaaagaa
caaatcgaaccgccagcgccgaaagagtaa
DBGET
integrated database retrieval system
