Ureibacillus thermophilus: DKZ56_02985
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Entry
DKZ56_02985 CDS
T09780
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
uth
Ureibacillus thermophilus
Pathway
uth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DKZ56_02985 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uth03021
]
DKZ56_02985 (rpoB)
03400 DNA repair and recombination proteins [BR:
uth03400
]
DKZ56_02985 (rpoB)
Enzymes [BR:
uth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DKZ56_02985 (rpoB)
Transcription machinery [BR:
uth03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
DKZ56_02985 (rpoB)
DNA repair and recombination proteins [BR:
uth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
DKZ56_02985 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
QBK24918
UniProt:
A0A4P6USS7
LinkDB
All DBs
Position
618447..621995
Genome browser
AA seq
1182 aa
AA seq
DB search
MTGQLVQYGRHRQRRSFARIKEVLELPNLIEIQTSSYEWFLKEGLLELFKEISPIEDFTG
NLSLEFVDFSLGEPKYDVDECKERDVTYAAPLRVKVRLHNKETDEVKEQDVFMGDFPLMT
ETGTFIINGAERVIVSQLVRSPSVYYHDKTDKNGKKGFGATVIPNRGAWLEFETDAKDIV
YVRIDRTRKLPATVLLRALGFGSDQEILDIIGDNEYLRNTIEKDNTDSTEKALIEIYERL
RPGEPPTVENAKSLLYSRFFDAKRYDLAAVGRYKMNKKLHIKNRLFNQRIAETLVDPETG
EIIVEKGTILDRRTLDKILPYLEKGVGFRTLSQVGGVLDGDITIQSIKIYAPNDEDKIIN
VISNANVEEEVKHLTPADIIAALSYFFNLLYGVGNVDDIDHLGNRRLRSVGELLQNQFRI
GLSRMERVVRERMSINDTASIVPQQLINIRPVIAAIKEFFGSSQLSQFMDQTNPLAELTH
KRRLSALGPGGLTRERAGMEVRDVHYSHYGRMCPIETPEGPNIGLINSLSTYAKVNKFGF
IETPYRRVDPETGRVTDQIDYLTADEEDNYIVAQANSPLNPDGTFAKEEVLGRFRGDNTV
FKRELVDYMDVSPKQVVSAATACIPFLENDDSNRALMGANMQRQAVPLIQPEAPYVGTGM
EYVAARDSGAAVVCKHEGIVEHVESREIRVRRIEVKDGKEVKGELDVYKLQKFQRSNHGT
CINQRPIVKVGDRVKPRDILADGPSMDKGELALGRNVLVAFMTWEGFNYEDAIIMNERLV
KDDVYTSIHIEEYESEARDTKLGPEEITRDIPNVGEDALRNLDDRGIVRIGAEVRDGDIL
VGKVTPKGVTELTAEERLLHAIFGEKAREVRDTSLRVPHGAGGIVLDVKVFNREDGDELP
PGVNQLVRVYIVQKRKIRVGDKMAGRHGNKGVISRILPEEDMPFLPDGTPVDIMLNPLGV
PSRMNIGQVLELHLGMAARKLGQYMATPVFDGANEEDVWSTMEEAGIARDGKTILYDGRT
GEPFDNRVSVGIMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWA
LEAYGAAYTLQELLTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLGLDV
KMLTVDEEEIELRDMDDEEDLQPADALNILPAKEEKPVETQK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
ttgacaggtcaactagttcagtacggacgacaccgccagcgtagaagctttgcgcgcatt
aaagaggtgttggagcttccaaatttaattgagattcaaacatcctcatacgaatggttc
cttaaagaaggattgcttgagttgtttaaagaaatttccccaattgaggatttcacaggc
aatctctcccttgaatttgtcgatttttcattaggtgaaccaaaatatgatgtcgatgaa
tgtaaggaacgagatgtaacttatgcagctccattgcgtgtaaaggtacgtcttcataac
aaagaaactgatgaagtaaaagaacaagatgtgttcatgggggatttcccattaatgact
gaaacaggcacatttattatcaatggtgccgaacgggttatcgtatctcagttggtacgt
tcgccaagcgtatattatcacgataaaacagacaaaaacggcaaaaaaggatttggtgca
acggtcatccctaaccgcggcgcatggctagagtttgaaacagatgcaaaagacattgtt
tatgtccgcatcgatcgcactcgtaaattgccggctaccgttttattaagagcgctaggc
tttggttctgatcaagaaattcttgatattatcggcgacaacgaatatttgcgcaacacg
attgaaaaagacaatacagatagcacggaaaaggcattgattgaaatttatgaacgcctt
cgtccgggtgaaccgccaacagttgaaaacgccaaaagcttgctttattcccgtttcttt
gatgcgaaacgctatgatttagcggctgttggtcgttataaaatgaataaaaaattgcat
ataaaaaatcgtttgttcaatcaaagaattgccgaaacattagtcgaccctgaaacaggg
gaaattattgtcgaaaagggtacaattcttgatcgccgtacattagataaaattctgcct
tatttagagaaaggtgtcggattccgtactttatctcaagtaggcggtgtattggatgga
gatattacaatccaatccattaagatatatgctccgaatgatgaagacaaaatcatcaac
gtgatttctaacgcaaacgttgaagaggaagtgaaacatttaacaccagctgatattatc
gctgccttgtcatacttcttcaacttgctatatggcgtaggaaacgtggatgacatcgat
catttaggtaatcgtcgtttacgttcagttggggaattgttgcaaaatcaattccgcatt
ggactttcccgtatggaacgtgtagtgcgtgaacggatgtccattaacgatacggcttcc
atcgtgccgcaacaattgattaatattcgtcctgtgattgcagcaattaaagagttcttt
ggtagctcgcaattatctcaatttatggaccaaacaaacccgctagcagaattaacgcat
aaacgccgtctttctgccttaggaccaggtggtttaacgagagaacgtgcaggtatggaa
gtgcgcgacgttcactactcacactatggtcgtatgtgtccgattgaaacgccagagggt
ccaaacatcggattaatcaactcgctatcaacttatgcaaaagtgaataaattcggcttt
attgaaaccccataccgccgagttgaccctgaaacagggcgagtaacagatcagattgac
tacttgacagcggatgaagaagacaactatatcgtggctcaagcgaactcaccgttgaat
ccagacggtacatttgccaaagaagaagttttaggtcgtttccgtggagacaacacagtt
ttcaaaagagaattagttgactacatggacgtatcaccaaaacaagtagtatctgcagcg
acagcatgtattccgttcttagaaaacgacgactccaaccgcgcgttgatgggggcaaac
atgcagcgtcaggcagtgccattaatccaaccggaagctccttatgtagggacaggaatg
gaatacgttgccgctcgtgactccggtgctgcggtagtctgcaaacacgaaggtatcgtg
gaacatgtggaatcaagagagattcgcgttcgccgcattgaagtgaaagatggcaaagaa
gtaaaaggcgaactagatgtctataagcttcagaaattccaacgttccaaccacggtaca
tgcattaaccaacgtccaatcgtgaaagttggagatcgcgtaaaaccaagagatatctta
gcggatggtccttccatggataaaggcgaacttgctttaggtcgcaacgttcttgttgcc
ttcatgacatgggaaggtttcaactacgaagacgcgattatcatgaacgaacgtcttgta
aaagatgatgtgtatacatccattcatattgaagaatatgaatcagaagctcgtgataca
aaattaggtccagaagaaattactcgcgatattccaaatgtgggcgaagatgcacttcgc
aaccttgacgatcgcggtattgtccgcattggtgcagaggtgcgcgatggagatatctta
gtagggaaagtaacgccaaaaggagttacagagttaacagctgaagaacgattgctccat
gcgattttcggtgaaaaagcccgcgaagtgcgtgatacatcattgcgtgtaccacacgga
gcaggtggtatcgttcttgatgtaaaagtcttcaaccgcgaagatggagatgaattgcca
ccaggagttaaccagctcgtgcgtgtttacattgttcaaaaacgcaaaatccgcgtcggt
gacaaaatggccggacgccacggtaacaaaggggttatttcccgcatattacctgaagaa
gatatgccattcttgccagacggaactccagttgacatcatgttaaatccattgggcgta
ccgtctcgtatgaacatcggacaagtgttggaacttcacttaggtatggctgctcgaaaa
ttaggtcaatacatggctactccagtatttgatggagccaacgaagaagatgtttggagt
acaatggaagaagcgggaattgctcgagacggtaagacaatcctttacgatggacgcacg
ggagaaccgtttgataaccgagtatctgtcggcatcatgtacatgattaaactcgcccac
atggttgatgataaacttcatgcccgttcaactggtccatactcgctcgtaacgcaacag
ccactgggcggtaaagcgcagttcggcggacaacgtttcggtgagatggaggtttgggca
ctagaagcttatggtgcagcttatacacttcaagaattattaacaatcaaatccgatgac
gttgtaggccgcgtgaaaacttacgaagccatcgtaaaaggcgaaagtgttcctgaacca
ggcgtaccagaaagtttcaaagtgttaattaaagaacttcaatcactaggattagacgtg
aaaatgctcacagttgacgaagaagaaatcgaattgagagatatggatgatgaagaggat
cttcaaccagcagatgctctcaatatcttgccagctaaagaagaaaaacctgttgaaact
caaaaataa
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