Ureibacillus thermophilus: DKZ56_04805
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Entry
DKZ56_04805 CDS
T09780
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
uth
Ureibacillus thermophilus
Pathway
uth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DKZ56_04805 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
uth03021
]
DKZ56_04805 (rho)
03019 Messenger RNA biogenesis [BR:
uth03019
]
DKZ56_04805 (rho)
Transcription machinery [BR:
uth03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
DKZ56_04805 (rho)
Messenger RNA biogenesis [BR:
uth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DKZ56_04805 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
ATPase_2
AAA_22
AAA
AAA_25
Spore_III_AA
AAA_24
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QBK25237
UniProt:
A0A4P6URL3
LinkDB
All DBs
Position
975265..976542
Genome browser
AA seq
425 aa
AA seq
DB search
MSLTIAQLENMTLKELYNLAREYKISYYSKLTKKELIFAILKSRSELEGYFFMEGILEIV
NSEGFGFLRPINYSPSKEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYYGLLQVDAV
NGEDPEIAKERVHFPALTPIYPNRQIKLETTPDKLSTRIIDLVAPIGFGQRGLIVAPPKA
GKTTLLKEIANAITTNYPQAELIVLLIDERPEEVTDIERSVKADVVSSTFDEVPENHVKV
AELVLERARRLVEHKRDVIILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFFG
SARNIEEGGSLTILATALIDTGSRMDEVIYEEFKGTGNMELHLDRNLAERRIFPALDIRR
SGTRKEELLIPQDQLEKLWAIRKTFTDAPDFTERFLKKLRSTESNEEFFEILNEEMKKVK
GKGLL
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcacgattgctcaattagaaaacatgacgttgaaggaattatataatcttgca
agagaatacaaaatttcctactatagcaaattaacaaaaaaagaattaatctttgcaata
ttgaaatcacgttcagaattagaaggctatttctttatggaagggattctcgaaatcgtc
aattcagaaggttttggcttccttcgacctatcaactattcgccttccaaagaagacatt
tatatttcagcttcgcaaattcgacgttttgaccttcgaaatggcgataaagtttctggt
aaagtacgcccaccaaaagaaaatgaaaggtattatggattgcttcaagtagacgcagta
aacggagaagatccggaaattgcgaaagaacgcgttcacttcccagctttaactccaatc
tatcctaatcgacaaatcaaacttgaaacaacacctgataaattatccacaagaattata
gacttagtggcgccgattgggtttggacaacgtgggttaattgtagcaccgcctaaagca
ggtaaaacaacgttattaaaagaaattgccaatgctatcacaacaaattatcctcaagca
gaactcatcgtgttattaattgatgaacgtccagaagaagtaacggatattgaacgttcc
gtgaaagccgatgtggtaagttctacctttgatgaagtgcctgaaaatcacgtaaaagtg
gcggagttggtattggaacgcgcccgacgtctagtggaacataaacgcgatgtcattatc
ttaatggattccattacgagactggcaagggcttataacttagtcattccaccaagcgga
agaactctatccggtggaattgacccagcggcatttcatcgtcctaaacgattctttggt
tcggctcgaaacattgaagaaggcggcagcttgacgattttagcgacagcgctgatcgat
acaggttcccgcatggatgaggttatttatgaagaatttaaaggaacgggaaacatggag
ttacatttagaccgcaacttggcagaacgccggattttcccagcattggatattcgccgt
tctggtacacgaaaagaagaattattaattccgcaagatcaattagaaaaactttgggca
attcgaaaaaccttcactgacgctcctgattttacagaacgtttcttgaaaaaacttcgc
tcaacagaatccaacgaagaattttttgaaatcttaaatgaagaaatgaaaaaagtaaaa
ggcaaaggattgctttaa
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