Ureibacillus thermophilus: DKZ56_05785
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Entry
DKZ56_05785 CDS
T09780
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
uth
Ureibacillus thermophilus
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
uth03400
]
DKZ56_05785 (addA)
Enzymes [BR:
uth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DKZ56_05785 (addA)
DNA repair and recombination proteins [BR:
uth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
DKZ56_05785 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
Condensin2nSMC
AAA_30
DUF2059
AAA_12
AAA_16
DUF7793
ResIII
Med15_M
Motif
Other DBs
NCBI-ProteinID:
QBK25405
UniProt:
A0A4P6US84
LinkDB
All DBs
Position
1174871..1178599
Genome browser
AA seq
1242 aa
AA seq
DB search
MNPIPIKPKDATWTDEQWKAIWATGQDILVSAAAGSGKTAVLINRMIEKVIAKENPINVD
ELLVVTFTNAAAAEMRHRLAKALEKEIAKDPHNAHLRKQLSLVNKAQISTLHSFCLSIVR
QYAYLIDIDPGFRIASEGEVSLLRDDVLKDVMEEAYSAEDEAEAARIYRLVDSFTSDRDD
QEIEKLIEQLYDNARVHPAPEKWLHSLVEQYQLSEDVTVDDLPFINYVKNSIAFQLEEAR
SHLLAVRKYALMPDGPHAYGETVELDLALIQEALRRIRSSWQEAYEFFAVLKWETLARMP
KDSCDEELKKKAQEKRNKAKEIVKKIQETYFVRKPERLIQEIRLMAPTIETLVELTLKFG
EKFKRAKLEKGILDFSDLEHYALDILTVEENGEMKPSPVALEFQGRFKEVLVDEYQDTNM
LQETILQLVKSGDESNGNLFMVGDVKQSIYRFRLAEPMLFLHKYLTFEEEPKTSGLKIDL
NANFRSRKEVLYGTNYIFEQVMGEKVGEISYDEKAALKPSAPYNELDMPVELAIIHEEQP
DASSENEEDEDFDQIMEEEMKKSQQEARFIIQRIKELMESGATVYDTKQKDQKKRIRPLK
YSDIVILMRSMTWSGDIIEEFKKANIPLYAESSKGYFEALEVMIMMNLLKVIDNPYQDIP
LASVLRAPFVGLKENELALIRLTDKNAPFYEAVKKFVENEQSGLEAETQAKLEKFLQQLD
VWRDLARRGSLSDLIWKIYLDTHYYEMVGAMSNGKQRQANLRALHDRALTFEKSSYRGLF
RFLRFIDRMKARGEDLGVAKSIGEKDDVVRLVTIHSSKGLEYPVVFVAGLGNRFNLRDFN
EPYLFDQNFGLAVKAIDPDNRIMYTSLPFFAIKEKKKLELIAEEMRILYVAMTRAKERLI
LVGSVKDWEKAMQAWCEMQSLPPDEMLPDYVRARARSYLDWIGPAIARHKVFKEYSHGDY
VPLEHPSTWKIMVISNGTFMKKSIDEEETANEEMMEDVDETLLEELNRRFTYVYPFERAT
KKKSKTSVSEMKRVENLQHEEEAEYIRMIIKNRNKSLVKRPAFMQEKQISAAEIGTAMHT
VMQHVPQKGFENTEEAQHFLDELVEKQLITEEERKAIELEKLLHFFQTPIGKRFSSAKQL
NRELPFTLSVKDADGDSQIIQGIVDCLMQDEEGKWVLLDYKTDKILPSFAEEKALIQEMT
KRYGVQIRLYTEAVEKILQIQVDEKVLYLFDAGKAVPLQSLG
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaatccgattcctattaaaccaaaagatgccacatggacagacgagcaatggaaagcg
atttgggcaacagggcaggatattcttgtttctgcggcggctgggtcaggaaaaacggcg
gtgcttatcaaccggatgatcgaaaaggtcattgcgaaagaaaatccgattaatgtggac
gagctgcttgtggtgacctttacaaacgctgctgcggcagaaatgcgccatcgacttgca
aaggcactggaaaaggaaatcgcaaaagacccgcacaatgcccacttgcgaaagcagctg
agccttgtcaacaaagcccaaatttccacattgcactccttttgcttatctatcgttcgg
caatatgcctatttgattgatattgacccgggattccgcattgccagtgaaggggaagtt
tcgcttttgcgggatgatgtgttaaaagacgtcatggaagaagcgtacagcgccgaagat
gaagcagaagccgctcgcatttaccggttagtggacagcttcacctccgaccgggatgac
caggaaattgaaaagttgatagagcaattatatgacaatgcgcgtgttcatccggcaccg
gaaaaatggcttcattcccttgtggagcaatatcagctttctgaggacgtaacggtggat
gatttacctttcatcaattatgtgaaaaattccattgcatttcagttggaagaagctcgg
tcgcaccttttagcggtgagaaagtatgctttaatgccagatgggccgcatgcctacgga
gaaacagtggaattggatttggcccttattcaagaggcattgcggcgcatccgttcttct
tggcaagaagcttatgaattttttgctgtgttaaaatgggaaacccttgcgcggatgccg
aaagattcctgcgatgaagaattgaaaaagaaagcgcaagagaaacggaataaagcaaaa
gaaattgtaaaaaaaattcaagaaacgtattttgtgcggaaaccagagcgcctgattcaa
gaaatccgtctgatggctccaacgattgaaacattggtggaacttacgctgaaatttggc
gaaaagtttaaacgggcgaaattggaaaaaggcattttagatttttcagaccttgaacat
tatgccctcgacattttaacggtggaagaaaacggagaaatgaaaccctcccctgttgct
ttagaattccaagggcggtttaaagaagtgcttgtggatgaataccaagatacgaatatg
ttgcaagagacaattttacagcttgtaaaaagcggcgatgaaagcaacgggaatctattt
atggtaggggatgtgaagcagtcaatttaccgcttccgtctagcggaaccaatgctcttt
ttgcataagtatttaacttttgaagaagagccgaaaacaagtgggctaaaaattgattta
aacgccaatttccgcagcaggaaagaagtcctttatggaacgaactatattttcgaacaa
gtgatgggcgaaaaagtaggagaaatttcttatgatgagaaagccgcattaaaaccgagt
gcgccgtacaatgaattagatatgccggtggagttggccattatacatgaggaacagccg
gatgcttcatcggaaaatgaagaagatgaagatttcgatcaaatcatggaagaagaaatg
aaaaaatctcaacaagaagcccgctttattattcaacgcatcaaggagctaatggaatcg
ggggcgactgtctatgatacgaaacaaaaagatcaaaaaaagcgcatccgtccattaaag
tacagcgatattgtcatccttatgcgatctatgacatggtccggcgatattattgaagaa
tttaaaaaggccaatattccgttatatgcggaaagttccaaaggctattttgaagcgttg
gaagtcatgatcatgatgaatttattaaaagtcatcgacaatccatatcaagacattcct
ttggcatccgttttacgggctccctttgtgggactgaaggaaaatgaattggcactcatt
cgtttaaccgacaaaaatgcgcctttttatgaagcggtgaaaaaatttgtggaaaacgag
caatcagggcttgaagctgaaacgcaggcaaagcttgagaagtttttgcagcagcttgac
gtatggagggatttggctcgccgcggcagcctttctgatttaatttggaaaatttattta
gacacccattattatgaaatggttggagccatgtcaaacggcaaacagcggcaagccaat
ttgcgtgcgctccatgaccgggcattaacctttgaaaaatcttcctatcgtggattattc
cgatttttgcgtttcattgatcgaatgaaagcgcgtggggaagatttaggcgtcgccaag
tccattggggagaaggatgatgtggtgcgtttagtgacgattcactcctccaaagggctt
gagtatccagtggtgtttgtggcgggactaggcaatcgttttaatttaagagattttaat
gaaccttatttatttgaccaaaattttggccttgctgtaaaagccatcgatccggataac
cgaatcatgtacacttctttgccgttttttgccatcaaagaaaagaaaaaattggaatta
attgcagaggaaatgcggattttatatgtggcgatgactcgggcgaaagaacggctgatt
ctcgtcggttctgtgaaagattgggaaaaagcgatgcaagcttggtgtgaaatgcaaagt
ttgcctccggatgaaatgctaccagattatgtgagagcacgggcgagaagctatcttgat
tggattggtccggccatcgcaagacataaagtttttaaagaatatagtcatggggattat
gtaccgttagaacatccatccacatggaaaataatggttatttctaatgggacattcatg
aaaaaatccattgatgaggaagaaacagcaaacgaagaaatgatggaagatgtggatgaa
acattgctggaagaattgaatcgccgctttacttacgtctatccatttgaacgggcgacg
aagaaaaaatcaaaaacaagcgtatccgaaatgaagcgagttgaaaatttgcagcatgag
gaagaagcggaatatataaggatgatcattaaaaatcgcaataaatccctcgttaaacgt
ccggcatttatgcaggaaaaacaaatttctgcagcagaaatcggaacggcgatgcatact
gtgatgcagcatgtgccgcaaaaaggatttgaaaatacagaagaagcgcagcattttctt
gatgagcttgtcgaaaagcaattaatcacagaagaagaacggaaagccatcgaactcgaa
aaactgcttcatttctttcaaacaccgattggaaaacgatttagcagtgcgaaacaattg
aatcgagaactgccttttaccttaagtgtgaaggatgcagacggcgattcccaaatcatt
caagggattgtcgattgcttgatgcaagatgaagaaggaaaatgggtgcttcttgattac
aaaacagataaaatcttgccttcttttgcggaagaaaaggcattgattcaggaaatgact
aagcgctacggggtgcaaatccgcctatatacagaagcggtggagaagattttgcaaatt
caagtagatgaaaaagttctttacttgttcgatgcagggaaagcggtgccgttacagtcg
ttaggttga
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