Ureibacillus thermophilus: DKZ56_06965
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Entry
DKZ56_06965 CDS
T09780
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
uth
Ureibacillus thermophilus
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uth03032
]
DKZ56_06965 (topA)
03400 DNA repair and recombination proteins [BR:
uth03400
]
DKZ56_06965 (topA)
Enzymes [BR:
uth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
DKZ56_06965 (topA)
DNA replication proteins [BR:
uth03032
]
Prokaryotic type
DNA Topoisomerases
DKZ56_06965 (topA)
DNA repair and recombination proteins [BR:
uth03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DKZ56_06965 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
DUF2996
Toprim_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
QBK25620
UniProt:
A0A4V1A310
LinkDB
All DBs
Position
1409823..1411898
Genome browser
AA seq
691 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVIDLPKSQMGIDTENNYQPKYITIRGK
GPILQELKTAAKKAKKVFLAADPDREGEAIAYHLAKALNIDTESECRVVFNEITKDAILE
SFKHPRPINKHLVDAQQARRVLDRLVGYNISPILWKKVKKGLSAGRVQSVALRLIIDREN
EIKNFVHEEYWTIEGKFEKDKKQFEALYFGNGKEKVKLTNQKQVEEILQKIEGSEFEVLN
VTKKERKRNPAPAFTTSSLQQEAARKLNFRAKKTMMIAQQLYEGIDIGKQEGTVGLITYM
RTDSTRVSEAAKAEAMQYIYDQYGKEYVAGEIQKVKKQPAAQDAHEAIRPTSVMRTPEQL
KDVLTRDQLRLYRLIWDRFVASQMAPAVLDTVTVELKNSDCIFRANGSQVKFSGFMKVYV
EGTDDQTEETTKMLPDLQVGDKIKSVEINPKQHFTQPPPRYTEARLVKELEELGIGRPST
YAPTLDVIQRRGYVQLDNKRFVPTELGEIVHSLMVEFFPEIIDIEFTAKMEADLDKIEEG
KIDWIQIIDNFYKDFEKHLQYADEAIEKIEIKDEPTGEDCEICGAPMVYKLGRYGKFMAC
SNFPECRNTKTITKPIGVKCPKCKTGEIVERKSKTKRVFYGCEKYPDCDFMSWDKPISRP
CPKCNSLLVEKKVKKGVQVQCTNCDYEESTQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtgatagtggaatcaccagcaaaagcgaaaaccattgaacgctat
ttaggaaaaaaatataaagtaaaagcatccattggacatgtaatcgatcttcctaaaagc
caaatggggattgatacggaaaataattatcaacctaaatatataacaatccgcggaaaa
ggcccgatcttgcaggagttaaaaactgctgccaaaaaggcgaaaaaagtatttcttgca
gccgaccctgaccgagaaggtgaagcgattgcatatcatttagcgaaagcgttaaatatc
gatacagaaagtgaatgtcgggtggtatttaacgaaattacaaaggatgcgatattagaa
tcgttcaagcatcctaggcccattaataaacatcttgtggatgcccaacaagcacgcaga
gtattagaccggcttgttggttacaatataagcccaatattatggaaaaaagtcaaaaaa
ggactatcggctggccgagtgcagtctgttgcgttgcgtcttattatcgacagggaaaat
gagattaaaaatttcgttcatgaagaatattggacaattgaaggaaaatttgaaaaggat
aaaaagcaatttgaagctttatatttcggaaatggaaaagaaaaagtaaaactgacaaat
caaaaacaagttgaagaaattcttcaaaaaatagaaggttccgaatttgaagttttaaat
gtaacgaaaaaggagagaaaaagaaatccagctccagcttttacaacttcctcccttcag
caagaagcagcaaggaaattaaatttccgggcgaaaaagacgatgatgattgcccagcag
ctttatgaaggaattgatattggaaaacaagaaggaacagtcgggttaattacttacatg
cgtacagattcaacgcgggtttcagaggctgcaaaagcagaagcaatgcaatatatttac
gatcaatatggtaaggaatatgtggctggggaaattcaaaaggtgaaaaaacaaccagct
gcccaagatgcccacgaagccattcgtccaaccagcgttatgagaacgcctgaacaattg
aaagatgtgctaacacgcgaccaactgagactttaccgcctaatttgggatcgttttgta
gccagccaaatggcgccggctgtattggatacagtgacagtggaactaaaaaattcggac
tgcatcttccgggcaaatggttcacaagtgaaattttcagggtttatgaaagtctatgtg
gaaggaacagacgaccaaacggaagaaactacaaaaatgcttcccgatttacaagtgggg
gacaaaattaaatctgtagaaattaatccaaagcaacatttcactcaaccgcctccacgc
tatacggaagcaagacttgtaaaagaattagaagaacttggcattggaaggccttccacc
tatgcaccaacccttgatgttattcaaagacgcggatatgtacaactcgataataaacgc
tttgtaccaacggagctgggggaaatcgtccattcattaatggttgaatttttcccagaa
attattgacatcgaatttacagcaaaaatggaagcggatttagacaaaatcgaggaagga
aaaattgactggatccaaattattgataatttttataaagattttgaaaaacatctccaa
tatgctgatgaagccattgaaaaaattgaaattaaagatgaaccaacaggtgaagactgt
gaaatatgcggtgcaccaatggtctataaattagggagatatgggaaatttatggcttgt
tccaatttcccggaatgccgaaatacaaaaactattacaaaaccaatcggcgtaaaatgt
ccaaaatgtaaaaccggtgaaattgtggaacggaaaagtaaaacaaaacgagtgttttac
ggttgtgaaaaatatccagactgcgattttatgtcttgggataagccgattagtagacct
tgtccaaaatgcaattcattattagttgaaaagaaagtgaaaaaaggtgtacaagttcaa
tgtacaaattgcgactatgaagaatctacacaataa
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