Ureibacillus thermophilus: DKZ56_08870
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Entry
DKZ56_08870 CDS
T09780
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
uth
Ureibacillus thermophilus
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
uth03019
]
DKZ56_08870
03009 Ribosome biogenesis [BR:
uth03009
]
DKZ56_08870
Enzymes [BR:
uth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DKZ56_08870
Messenger RNA biogenesis [BR:
uth03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
DKZ56_08870
Ribosome biogenesis [BR:
uth03009
]
Prokaryotic type
rRNA helicases
DKZ56_08870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
NAT10_TcmA_helicase
Flavi_DEAD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
QBK25961
UniProt:
A0A4P6UUT1
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All DBs
Position
1798834..1800126
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AA seq
430 aa
AA seq
DB search
MSNFTEFQLKPFIMDAIQKLGFKEPTPIQKEMIPLILEGKSAIGQAHTGTGKTHAFLLPI
VQRIDVNKQEVQAVITSPTRELATQIYERLKEIIEGTEITSKLLIGGTDKQRLMEKLKTQ
PHIVVGTPGRIHDLVKENALLVHKAPILVVDEADLAFDMGFIEEIDGFAARMPEKLEMYV
FSATIPVKLQPFLKKYMESPVHIKINDRRPVAEGIEFFLVPIRSKNRKDKLLEVCNTINP
FLCLIFCNTRKTADEVASFLSENGIRTGEIHGDLTPRERKKMMKQIRDLEFPYIVATDLA
ARGIDIEGVSHVINYELPEDLEFFVHRVGRTARAGLEGTAITLYGPDDEDDLDRIDEKLG
IPFKHRDIKDGEWVELKDRQARKKRIKQENELDKIAKAIVRKPKKVKPGYKKQMRMEMQK
IKKKLKKSHR
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaactttacagaatttcaattgaaaccttttattatggacgccattcaaaaactc
ggctttaaagaaccaactccgattcaaaaagaaatgattccgttgattctggaagggaaa
agcgccattggacaagcccataccggaactgggaaaacccacgcctttttattgccgatc
gttcaacggattgatgtaaataaacaggaagtacaagctgtcattacttctccaacaaga
gaattggcgacacaaatttacgaacgtttaaaagaaatcattgaaggcacagaaattacg
tcgaaattattgatcggcggtacggataagcagagattgatggaaaaactgaaaactcag
cctcatatcgtggtggggacacctgggcgtattcatgatttagtgaaggaaaatgcgctc
ttagtccataaagcgccgattttagtcgtggatgaagcagacctagctttcgacatggga
tttattgaagaaattgacgggttcgctgccagaatgcctgagaaattagaaatgtatgtg
ttttcagcgaccattcctgtaaaattgcagccatttctgaaaaaatatatggaatctcct
gtccacattaaaataaatgatcggagaccggtcgcagaaggcatcgaatttttccttgtg
ccaattcgctcaaaaaaccggaaggacaaattgttggaagtatgcaacaccatcaatcca
tttttgtgcctcattttctgcaatacgagaaaaacagcggatgaagtggcaagcttctta
tccgaaaatggaatccgcaccggagaaattcatggggatttaacgccaagagaacgcaaa
aaaatgatgaagcagattcgcgatttggaattcccatatattgttgccactgatttggca
gcaaggggcattgatattgaaggcgtttcccatgtaatcaattatgagcttccggaagat
ttggagttttttgtacaccgcgttggaagaacggcgcgtgcaggtttggaaggaacagcg
atcactttatatggtccggatgatgaggacgatttggaccgcattgatgaaaagctgggc
attccattcaaacatcgggatattaaggatggagaatgggtcgaattaaaagaccgccaa
gcacgcaagaaacgtattaaacaagaaaatgaattagataaaattgccaaagcgattgtc
cgaaaaccgaaaaaagtaaaacctggatataagaaacaaatgcgcatggaaatgcaaaaa
attaagaaaaagttgaaaaagagtcatcgatag
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