Ureibacillus thermophilus: DKZ56_11965
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Entry
DKZ56_11965 CDS
T09780
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
uth
Ureibacillus thermophilus
Pathway
uth03030
DNA replication
uth03430
Mismatch repair
uth03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
uth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DKZ56_11965
03430 Mismatch repair
DKZ56_11965
03440 Homologous recombination
DKZ56_11965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
uth03032
]
DKZ56_11965
03400 DNA repair and recombination proteins [BR:
uth03400
]
DKZ56_11965
Enzymes [BR:
uth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DKZ56_11965
DNA replication proteins [BR:
uth03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DKZ56_11965
DNA repair and recombination proteins [BR:
uth03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DKZ56_11965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QBK26517
UniProt:
A0A4P6UUM8
LinkDB
All DBs
Position
complement(2414727..2417795)
Genome browser
AA seq
1022 aa
AA seq
DB search
MSIYPQIRTSADLLKSTIRMEELIPFLVEQKAEACAIVNTKLYGLLPFYHGLKKAGIHPV
LGLTAQIQFDHTVLPLLIYAQNNDGYKNLLKISSSIAIRDDERLPIQWLKGYSNGICIVI
PATDEKGIWMENVSIIETLKLIFNGRIWLGVSRMGGEKSAFENEVIHLSEEYHIPIMAIH
ECLYLKREDAFSYRVARSIDQGIKLSEQRMKEDEHHYTPTQKEWIAWFEDRKEWLEESRK
MLYSCQVEIEHKGHIMPKFPVPEGKSAEQVLKELALDGLKERLETNSPNEIYMKRLHDEL
QMICSMGFADYFLIVADFMKYARERRILTGPGRGSSAGSLVAYSLYITQVDPIRYGLLFE
RFLNPERVTMPDIDIDFVDTRRQEVIEYVAKKYGEKHVAQIITFGSLSAKAVARDVARMF
NFESETLEMISRLIPNKLGITLMEAYQSSEPFRTWVLGEEIRKRWFETALKLEGLPRNAS
THAAGVVLSPVPLVEVIPIEKGHDGIFLTQWPMQEVEQMGLLKMDFLGLRNLTMIEQIQK
MIYYTRNQYIDLNKIPFDDKKTFELLQKGDTLGIFQLESEGMKKALREIAPTQFSDIVAV
NALYRPGPMQFISVYAKRKKRLEPVVMPHPDLEPILKETYGIIVYQEQIMQIAHTMAGFS
LGQADLLRRAVSKKKREVLEEQRAAFVNGAVKKGYSKEAADSVYEQIVRFADYGFAKSHA
VAYSMISYQMAFLKAHYPMEFYAVMMTFATGNQEKLFSFIVEAKSKGITILRPSLHHSNR
VFTVEKGSIRYSLSAISGVSQTVLQKLIEARKEQGKFHDIFDLAVALSGKYFNRKSIEPL
IKAGVLDDFGKDRATLLATIEAAEKHAKIVRPTEEEDLFSSEASLFGKPKYMEVPPIPNK
MKLQFEKEVLGFYLTEHPVANVRKQIPVNTNSLQLKSAPKDAYVKLVGMVESIRQLRTKN
GELMAFVQVQDEFGSISTTIFPKQYHECVGWIKEDVLVYLEGKVQYRYNQHQIIVKVIKM
LQ
NT seq
3069 nt
NT seq
+upstream
nt +downstream
nt
ttgtccatttatccgcaaatacgaacaagtgcagatttgctgaaaagtacgattcgtatg
gaagaactcatcccttttttagttgaacaaaaggcagaagcttgtgcaatcgtcaatacg
aaattgtacgggcttttgcctttttaccatggtttaaaaaaggctggaattcatccggtt
cttggtttgactgcacaaatacaattcgaccatactgttctgcccctcctgatttatgcc
caaaacaacgatggctataaaaacttattaaaaatatcaagcagcattgccataagagat
gatgaacgcctgccgatccagtggcttaaaggctactcgaatggaatttgtattgtgatt
cctgcaacggatgaaaaaggaatttggatggaaaatgtttcgataatcgaaacattaaaa
ctcattttcaatgggcgaatttggttgggcgtttcaagaatgggaggagaaaaatcagcc
tttgaaaacgaggtgattcatctaagcgaagaataccatattcccattatggcaattcat
gaatgtttatatttaaagagggaggatgcctttagttaccgggttgcgcgcagcatcgat
cagggcataaaattaagcgaacaaaggatgaaagaagacgaacaccattatacacctact
caaaaagaatggattgcgtggttcgaagaccgtaaagaatggctggaagaaagtaggaaa
atgctttatagctgccaagtggaaattgaacataagggacatatcatgccaaaatttcct
gtgccagagggaaaaagcgccgaacaagtgttgaaggagttggcgcttgatggattaaaa
gaaaggctagagacgaattcccccaatgagatttacatgaaaaggctgcatgatgaactg
caaatgatttgttccatgggctttgccgattattttttaatcgttgcggattttatgaag
tatgcccgggaacgtcgtattttaacagggcctggaaggggttcgtccgccggttctcta
gttgcatattccctctatattacccaagttgacccgattcgctatggacttttatttgag
cgatttttaaatcctgagcgggtgacgatgcctgatatcgatatagactttgtggatacg
agaaggcaggaagtcattgaatatgtggcaaaaaaatatggagaaaagcatgtagcccaa
attattacctttggctcgctgtcagcaaaagcggttgcgcgggatgtggcaaggatgttc
aattttgaatcggaaacccttgaaatgatttcccgccttattccaaataaattaggcatc
accttgatggaagcctatcaatccagtgaaccttttagaacttgggtgttaggggaagaa
atccggaaacgttggtttgaaacggcgctgaaattggaaggattgcctcgaaatgcttct
acccatgctgccggcgtggtgctgagtcctgttccgttagtagaggttatcccaattgaa
aaagggcacgacggcatttttctaacccaatggccgatgcaagaagtggaacaaatgggc
ttattgaaaatggactttttagggttgcgcaatttaacgatgattgagcaaatacaaaaa
atgatttattacactcggaatcaatatattgatttaaataaaattccttttgatgacaag
aaaacctttgaacttttgcaaaaaggggatacccttggaattttccagctggaatcggaa
ggaatgaaaaaggcattacgggaaattgcgccgacccaattttccgatattgtggcggtc
aatgccctttaccgtccgggaccaatgcaatttatttcagtttatgcgaaaagaaaaaaa
aggcttgaaccggttgtgatgccccatccggatttagagccgatattaaaagaaacttat
ggcatcattgtgtatcaagagcaaatcatgcaaatcgcccatacaatggcgggattctcg
ttgggacaagctgacttgttaagaagagcagtcagcaagaaaaaaagggaagtattggag
gagcaaagagccgcctttgtcaatggcgctgtgaaaaagggctacagcaaggaagcggca
gattctgtttatgaacagattgttcgatttgccgactatggatttgccaaaagccatgcc
gttgcatacagcatgatttcctaccaaatggcatttttaaaagcccattatcctatggag
ttttatgcggtgatgatgacctttgctacgggaaatcaagaaaagttattttctttcatc
gtcgaagcaaaaagcaaaggcatcaccattttgcgcccttccctacatcacagcaaccgc
gtgtttacggtggaaaaaggaagcattcgatacagcttatcagctatatcaggcgtttcc
caaactgttttgcaaaaattgatagaagcccgaaaggaacaaggaaaattccacgatata
ttcgatttagccgttgccttaagcggaaaatattttaaccgcaaatccattgagccttta
attaaagctggggtgttggatgattttggaaaggatcgggcaacgcttcttgcaacgatt
gaagcggcggaaaaacatgccaaaatcgtacgtccgacagaagaagaggatttattttca
tcagaggcttccctttttggtaagccaaagtatatggaagttccgccaatcccaaataaa
atgaagctgcaatttgagaaggaagtattaggcttttacttaacggaacatcctgtggcg
aatgtacgcaaacaaattccggtgaataccaatagtcttcaactgaaaagcgcccccaaa
gatgcctatgttaagctggtgggaatggtggagtccattcgccagctgcgcacaaaaaat
ggggagctaatggcctttgtgcaagtgcaggatgaatttggttctatctccacaaccatt
tttccgaaacaatatcatgaatgcgttggttggattaaagaagatgtgcttgtttattta
gaggggaaagtgcaataccgctacaatcagcatcaaatcatcgtaaaagtcataaaaatg
cttcaataa
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